Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 Y_RNA.460-201ENST00000384255 102 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
MEIS3Q99687 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
MEIS3Q99687 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
MEIS3Q99687 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MEIS3Q99687 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.4□□□□□ -1.87
MEIS3Q99687 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
MEIS3Q99687 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.4□□□□□ -1.87
MEIS3Q99687 OR4K11P-201ENST00000431829 904 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 RPS6P12-201ENST00000432491 726 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.4□□□□□ -1.87
MEIS3Q99687 RNU7-63P-201ENST00000459054 62 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 TTC39CP1-201ENST00000512513 755 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 RNA5SP356-201ENST00000515972 94 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 RNU4-49P-201ENST00000516080 140 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 AC022690.1-201ENST00000526681 550 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 AP005597.4-201ENST00000526762 229 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 OR4R1P-201ENST00000529879 463 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 AC128657.1-201ENST00000549459 145 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 OR4K8P-201ENST00000578842 1048 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 AC010928.3-201ENST00000587712 541 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 ELOCP29-201ENST00000588193 334 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 GLUD1P4-201ENST00000590914 418 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 VN1R80P-201ENST00000597126 338 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 AC068790.3-201ENST00000602988 553 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 AC013553.2-201ENST00000604244 589 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.4□□□□□ -1.87
MEIS3Q99687 AL365204.3-201ENST00000612448 685 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 AC107871.2-201ENST00000612894 502 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.4□□□□□ -1.87
MEIS3Q99687 TPTEP1-208ENST00000636884 213 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 MIR6715B-201ENST00000637172 77 ntBASIC3.4□□□□□ -1.87
MEIS3Q99687 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.4□□□□□ -1.87
MEIS3Q99687 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.39□□□□□ -1.87
MEIS3Q99687 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MEIS3Q99687 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MEIS3Q99687 Y_RNA.162-201ENST00000363683 102 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 RNY1P12-201ENST00000364251 105 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 SNORA51.4-201ENST00000364993 124 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 RNU4-20P-201ENST00000365601 151 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.39□□□□□ -1.87
MEIS3Q99687 RNU2-52P-201ENST00000410680 190 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.39□□□□□ -1.87
MEIS3Q99687 AF228730.4-201ENST00000421457 183 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.39□□□□□ -1.87
MEIS3Q99687 MTCO2P12-201ENST00000427426 682 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.39□□□□□ -1.87
MEIS3Q99687 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.39□□□□□ -1.87
MEIS3Q99687 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.39□□□□□ -1.87
MEIS3Q99687 RPS26P56-201ENST00000444468 240 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AL590399.6-201ENST00000446396 307 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AC104308.1-201ENST00000454621 333 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.39□□□□□ -1.87
MEIS3Q99687 VN1R104P-201ENST00000505115 1009 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.39□□□□□ -1.87
MEIS3Q99687 AC004062.1-201ENST00000509926 645 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AC110792.2-201ENST00000510278 224 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AC104057.1-201ENST00000515547 497 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 SNORA9.3-201ENST00000516383 129 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.39□□□□□ -1.87
MEIS3Q99687 OR4T1P-201ENST00000554933 911 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.39□□□□□ -1.87
MEIS3Q99687 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.39□□□□□ -1.87
MEIS3Q99687 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.39□□□□□ -1.87
MEIS3Q99687 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.39□□□□□ -1.87
MEIS3Q99687 AC007619.2-201ENST00000605743 379 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AL160413.1-201ENST00000622780 310 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 AL133216.2-202ENST00000634512 349 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 OR4G1P-203ENST00000641984 1631 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MEIS3Q99687 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MEIS3Q99687 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MEIS3Q99687 PNPT1P2-201ENST00000456768 2050 ntBASIC3.39□□□□□ -1.87
MEIS3Q99687 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MEIS3Q99687 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
MEIS3Q99687 AC097714.1-201ENST00000511272 1647 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
MEIS3Q99687 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MEIS3Q99687 Y_RNA.22-201ENST00000362492 102 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 SNORA63-201ENST00000363450 132 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 Y_RNA.157-201ENST00000363638 102 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 Y_RNA.326-201ENST00000365176 113 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 Y_RNA.367-201ENST00000365544 101 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 RNU6-108P-201ENST00000365558 107 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
MEIS3Q99687 UBE2V1P2-201ENST00000397758 440 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 SSXP10-201ENST00000402595 565 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 RNA5SP118-201ENST00000410385 109 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.38□□□□□ -1.87
MEIS3Q99687 AL139281.1-201ENST00000422120 335 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 TIMM9P1-201ENST00000436122 256 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 AC073415.1-201ENST00000449240 153 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 RPS29P15-201ENST00000458329 171 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.38□□□□□ -1.87
MEIS3Q99687 RPL31P13-201ENST00000484151 370 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.38□□□□□ -1.87
MEIS3Q99687 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.38□□□□□ -1.87
MEIS3Q99687 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.38□□□□□ -1.87
MEIS3Q99687 AP005639.2-201ENST00000527592 928 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 AC092470.1-201ENST00000546187 132 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms