Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 AL139095.1-201ENST00000404326 391 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC43Q96MW1 RPL23AP39-201ENST00000415533 405 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 SEPT2P1-201ENST00000419651 180 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC43Q96MW1 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC43Q96MW1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 SNORD97-201ENST00000459187 142 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC010486.1-201ENST00000511793 424 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 RNU6-581P-201ENST00000516214 105 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC107934.1-201ENST00000522215 217 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC43Q96MW1 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 MTND4LP18-201ENST00000526864 291 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC009163.5-201ENST00000575421 637 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 MIR4435-1-201ENST00000582552 80 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AL670379.6-201ENST00000603753 252 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AL670379.11-201ENST00000604059 253 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC104763.2-201ENST00000604179 382 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC008162.1-201ENST00000604718 254 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AL670379.1-201ENST00000604752 252 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AL670379.5-201ENST00000605253 252 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AL670379.12-201ENST00000605291 253 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AL670379.8-201ENST00000605353 252 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AL670379.7-201ENST00000605823 252 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AP000240.1-201ENST00000609910 452 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AL137847.3-201ENST00000611521 109 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC006338.1-201ENST00000618453 749 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AL391262.2-201ENST00000622466 494 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC025034.2-201ENST00000623264 286 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 PISRT1-201ENST00000626175 531 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC007671.2-201ENST00000637344 619 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 AC010149.2-201ENST00000637608 315 ntBASIC2.74□□□□□ -1.97
CCDC43Q96MW1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC43Q96MW1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC43Q96MW1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
CCDC43Q96MW1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC43Q96MW1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 SNORA72.3-201ENST00000365074 132 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AL359511.1-201ENST00000402970 211 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AL109913.1-201ENST00000421173 514 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC093106.2-201ENST00000428212 385 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC098826.1-201ENST00000433943 471 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 RNU6-953P-201ENST00000459154 107 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC026801.1-201ENST00000497178 464 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 RNU6-678P-201ENST00000516832 109 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AP000889.1-201ENST00000530968 660 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC021269.2-201ENST00000532318 330 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC027176.1-201ENST00000560204 514 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AC121334.2-201ENST00000605387 271 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AL021997.1-201ENST00000605757 193 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 CTSLP2-204ENST00000629029 392 ntBASIC2.73□□□□□ -1.97
CCDC43Q96MW1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC43Q96MW1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 SMIM11P1-201ENST00000369586 178 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 MIR518C-201ENST00000384822 101 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 RNU6-817P-201ENST00000391083 104 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 FCF1P10-201ENST00000407590 479 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC104454.1-201ENST00000421341 1401 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 Z98742.2-201ENST00000431564 187 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 RPS12P2-201ENST00000439728 269 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC118469.1-201ENST00000442943 488 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 MTND2P14-201ENST00000482139 351 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 MTND1P3-201ENST00000484956 952 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC092104.1-201ENST00000497346 1441 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC234781.5-201ENST00000508429 271 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 SCARNA3-201ENST00000517097 143 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC004944.1-201ENST00000517807 3059 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC022616.6-201ENST00000520479 119 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 MIR3118-1-201ENST00000581787 76 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 MIR4765-201ENST00000585007 77 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC103710.2-201ENST00000609912 942 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC104237.2-201ENST00000612456 443 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
CCDC43Q96MW1 FRG1KP-201ENST00000623592 341 ntBASIC2.72□□□□□ -1.97
CCDC43Q96MW1 AC093591.3-201ENST00000634516 308 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms