Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 AC007938.3-201ENST00000604965 623 ntBASIC4.48□□□□□ -1.69
FGD4Q96M96 AC009229.3-201ENST00000608056 282 ntBASIC4.48□□□□□ -1.69
FGD4Q96M96 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FGD4Q96M96 AC103858.2-201ENST00000621471 543 ntBASIC4.48□□□□□ -1.69
FGD4Q96M96 AL360181.4-201ENST00000621752 134 ntBASIC4.48□□□□□ -1.69
FGD4Q96M96 AL078596.1-201ENST00000624856 447 ntBASIC4.48□□□□□ -1.69
FGD4Q96M96 AC009093.8-201ENST00000641769 292 ntBASIC4.48□□□□□ -1.69
FGD4Q96M96 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.48□□□□□ -1.69
FGD4Q96M96 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FGD4Q96M96 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FGD4Q96M96 AC010300.1-201ENST00000600671 5134 ntBASIC4.48□□□□□ -1.69
FGD4Q96M96 AL049641.1-201ENST00000441055 1948 ntBASIC4.48□□□□□ -1.69
FGD4Q96M96 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FGD4Q96M96 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
FGD4Q96M96 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
FGD4Q96M96 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FGD4Q96M96 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FGD4Q96M96 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
FGD4Q96M96 Y_RNA.133-201ENST00000363428 110 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 Y_RNA.148-201ENST00000363557 117 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 RNU6-1303P-201ENST00000364841 107 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 MIR578-201ENST00000384828 96 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 Y_RNA.594-201ENST00000410373 140 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 SNORA57.3-201ENST00000411095 141 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.47□□□□□ -1.69
FGD4Q96M96 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.47□□□□□ -1.69
FGD4Q96M96 Z99755.1-201ENST00000414048 380 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.47□□□□□ -1.69
FGD4Q96M96 AC063979.1-201ENST00000415539 377 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 AL139247.1-201ENST00000422768 325 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.47□□□□□ -1.69
FGD4Q96M96 HSPD1P21-201ENST00000436541 245 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 HLA-N-201ENST00000437516 135 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 AC083863.1-201ENST00000438811 231 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.47□□□□□ -1.69
FGD4Q96M96 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.47□□□□□ -1.69
FGD4Q96M96 RPS24P6-201ENST00000452670 400 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.47□□□□□ -1.69
FGD4Q96M96 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.47□□□□□ -1.69
FGD4Q96M96 AC008716.1-201ENST00000511084 513 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 PTP4A1P4-201ENST00000512479 322 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 Y_RNA.720-201ENST00000517166 92 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FGD4Q96M96 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.47□□□□□ -1.69
FGD4Q96M96 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.47□□□□□ -1.69
FGD4Q96M96 MIR3921-201ENST00000577308 85 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 AC083806.3-201ENST00000614016 455 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 MIR7702-201ENST00000621931 59 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 AL031601.2-202ENST00000622650 282 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.47□□□□□ -1.69
FGD4Q96M96 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.47□□□□□ -1.69
FGD4Q96M96 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FGD4Q96M96 AC005183.1-201ENST00000603687 1979 ntBASIC4.47□□□□□ -1.69
FGD4Q96M96 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
FGD4Q96M96 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.47□□□□□ -1.69
FGD4Q96M96 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
FGD4Q96M96 SNORD46.1-201ENST00000364139 104 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 Y_RNA.404-201ENST00000383978 102 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 RNU6-1032P-201ENST00000384100 107 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
FGD4Q96M96 CRYBB2P1-203ENST00000415709 538 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 AL353621.1-201ENST00000418219 243 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 AL358176.2-201ENST00000425769 204 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 AC236972.1-201ENST00000433225 199 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 snoU13.24-201ENST00000458998 104 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 SUMO2P6-201ENST00000505273 288 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 MTND3P25-201ENST00000509243 135 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 AC092436.3-201ENST00000511788 257 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 RNU6-1046P-201ENST00000516538 107 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FGD4Q96M96 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.46□□□□□ -1.7
FGD4Q96M96 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.46□□□□□ -1.7
FGD4Q96M96 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.46□□□□□ -1.7
FGD4Q96M96 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.46□□□□□ -1.7
FGD4Q96M96 CYP4A43P-201ENST00000568156 121 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 AC012468.1-201ENST00000604888 430 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 AL161423.1-201ENST00000613700 262 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 AC091925.1-201ENST00000623204 462 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FGD4Q96M96 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FGD4Q96M96 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.46□□□□□ -1.7
FGD4Q96M96 MTND5P30-201ENST00000452896 1731 ntBASIC4.46□□□□□ -1.7
FGD4Q96M96 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FGD4Q96M96 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FGD4Q96M96 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
FGD4Q96M96 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.45□□□□□ -1.7
FGD4Q96M96 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
FGD4Q96M96 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.45□□□□□ -1.7
FGD4Q96M96 LINC02471-203ENST00000641941 4752 ntBASIC4.45□□□□□ -1.7
FGD4Q96M96 Y_RNA.158-201ENST00000363651 101 ntBASIC4.45□□□□□ -1.7
FGD4Q96M96 Y_RNA.463-201ENST00000384271 102 ntBASIC4.45□□□□□ -1.7
FGD4Q96M96 MIR301A-201ENST00000385261 86 ntBASIC4.45□□□□□ -1.7
FGD4Q96M96 RPL21P17-201ENST00000397467 475 ntBASIC4.45□□□□□ -1.7
FGD4Q96M96 AC113618.1-201ENST00000416747 285 ntBASIC4.45□□□□□ -1.7
FGD4Q96M96 MCFD2P1-201ENST00000417812 300 ntBASIC4.45□□□□□ -1.7
FGD4Q96M96 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.45□□□□□ -1.7
FGD4Q96M96 RPS24P13-201ENST00000442520 397 ntBASIC4.45□□□□□ -1.7
FGD4Q96M96 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.45□□□□□ -1.7
FGD4Q96M96 AL135752.1-201ENST00000479477 471 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms