Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AL157394.1-201ENST00000562983 1224 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC138761.3-201ENST00000579993 334 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC087683.1-201ENST00000591187 441 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC098826.3-201ENST00000603823 466 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AL451064.1-201ENST00000607718 471 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC034102.8-201ENST00000615146 484 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC084035.1-201ENST00000634543 607 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 OR5J1P-201ENST00000313544 939 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 RNU1-112P-201ENST00000364401 164 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 RNU6-7-201ENST00000364784 107 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 RNU6-8-201ENST00000365467 107 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 Y_RNA.359-201ENST00000365498 102 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 U8.9-201ENST00000365667 134 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AL512633.1-201ENST00000399931 655 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC104651.1-201ENST00000427559 735 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 GPM6BP2-201ENST00000432046 144 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 FCF1P1-201ENST00000432690 571 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 GPM6BP1-201ENST00000446387 144 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AL033528.1-201ENST00000453780 140 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC090525.1-201ENST00000479116 478 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC096576.1-201ENST00000489014 359 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AF131216.2-201ENST00000512316 564 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 RN7SKP132-201ENST00000516001 208 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 SNORA31.18-201ENST00000517043 134 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 RNA5SP165-201ENST00000517142 115 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC009977.1-201ENST00000586015 570 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC107294.1-201ENST00000609524 467 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AL355472.4-201ENST00000610233 626 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC104073.3-201ENST00000610942 955 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 MIR7106-201ENST00000612419 65 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AC108479.2-201ENST00000617314 601 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 MIR7515-201ENST00000637837 67 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RTL3Q8N8U3 Z82195.2-201ENST00000612348 18351 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 AL359693.1-201ENST00000614959 2407 ntBASIC2.8□□□□□ -1.96
RTL3Q8N8U3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 RN7SKP226-201ENST00000364912 300 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 Y_RNA.505-201ENST00000384489 102 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 MIR9-1-201ENST00000385198 89 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 RNU6-750P-201ENST00000390946 107 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 SNORA40.3-201ENST00000390964 122 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AL360182.1-201ENST00000397433 468 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AL590004.2-201ENST00000404787 371 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 RPL19P1-201ENST00000411635 428 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AC023141.4-201ENST00000412031 328 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 RPL26P27-201ENST00000414397 437 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 MTCO3P41-201ENST00000414801 328 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AC096649.2-201ENST00000416186 393 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 USP9YP14-201ENST00000430663 563 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 MTND6P13-201ENST00000443510 523 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 MTND2P33-201ENST00000506452 1031 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 RNU6-405P-201ENST00000516637 110 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 GTF3AP2-201ENST00000557014 266 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.79□□□□□ -1.96
RTL3Q8N8U3 MIR4528-201ENST00000577763 90 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 BNIP3P8-201ENST00000597863 560 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AC078795.2-201ENST00000602835 1252 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AL359999.1-201ENST00000604513 294 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 AL161798.1-201ENST00000604630 131 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 ATP1B3P1-201ENST00000605365 821 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 NDUFA8P1-201ENST00000605525 367 ntBASIC2.79□□□□□ -1.96
RTL3Q8N8U3 RPL23AP88-201ENST00000605759 454 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms