Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.07□□□□□ -1.92
SHFQ7M4L6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.07□□□□□ -1.92
SHFQ7M4L6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.07□□□□□ -1.92
SHFQ7M4L6 AC104027.1-201ENST00000521887 300 ntBASIC3.07□□□□□ -1.92
SHFQ7M4L6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SHFQ7M4L6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.07□□□□□ -1.92
SHFQ7M4L6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.07□□□□□ -1.92
SHFQ7M4L6 ZNF192P1-203ENST00000565888 810 ntBASIC3.07□□□□□ -1.92
SHFQ7M4L6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.07□□□□□ -1.92
SHFQ7M4L6 AC136601.2-201ENST00000604356 474 ntBASIC3.07□□□□□ -1.92
SHFQ7M4L6 MIR6748-201ENST00000610433 71 ntBASIC3.07□□□□□ -1.92
SHFQ7M4L6 AP003400.5-201ENST00000624827 617 ntBASIC3.07□□□□□ -1.92
SHFQ7M4L6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHFQ7M4L6 AC032011.1-201ENST00000611703 1549 ntBASIC3.07□□□□□ -1.92
SHFQ7M4L6 ZNF807-201ENST00000328088 1707 ntBASIC3.07□□□□□ -1.92
SHFQ7M4L6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.07□□□□□ -1.92
SHFQ7M4L6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.07□□□□□ -1.92
SHFQ7M4L6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHFQ7M4L6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SHFQ7M4L6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHFQ7M4L6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHFQ7M4L6 AL079305.1-201ENST00000623159 3008 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SHFQ7M4L6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SHFQ7M4L6 SNORD56.3-201ENST00000363507 71 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 RNU6-371P-201ENST00000364283 108 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHFQ7M4L6 SNORA48.8-201ENST00000391324 134 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AL162578.1-201ENST00000406202 378 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AL591034.1-201ENST00000407447 340 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC063979.1-201ENST00000415539 377 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.06□□□□□ -1.92
SHFQ7M4L6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC092047.1-201ENST00000424997 240 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 GPM6BP2-201ENST00000432046 144 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AL049641.1-201ENST00000441055 1948 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 GPM6BP1-201ENST00000446387 144 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AL671855.1-201ENST00000446875 1203 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 CECR9-201ENST00000453421 199 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AL590639.1-201ENST00000456484 337 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 PMCHL2-203ENST00000457791 237 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 RPL21P41-201ENST00000459863 264 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AP000852.1-201ENST00000472460 573 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC114786.4-201ENST00000508771 728 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC010486.1-201ENST00000511793 424 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 RN7SKP18-201ENST00000516005 275 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 Y_RNA.702-201ENST00000516843 96 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 RNU6-1315P-201ENST00000517187 99 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AP003122.3-201ENST00000526316 255 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC084851.1-201ENST00000529105 249 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHFQ7M4L6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC006557.5-201ENST00000603126 811 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 MTND4P35-201ENST00000604257 1375 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC092807.2-201ENST00000609367 243 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 AL136221.1-201ENST00000621449 509 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 MAPK10-362ENST00000641864 4484 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SHFQ7M4L6 AC093010.3-201ENST00000570269 15214 ntBASIC3.06□□□□□ -1.92
SHFQ7M4L6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SHFQ7M4L6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHFQ7M4L6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHFQ7M4L6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHFQ7M4L6 MIR148B-201ENST00000362252 99 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 Y_RNA.72-201ENST00000362894 103 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 RN7SKP227-201ENST00000364445 330 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 U3.12-201ENST00000364498 214 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHFQ7M4L6 RNU4-26P-201ENST00000410270 107 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.05□□□□□ -1.92
SHFQ7M4L6 AL035423.1-201ENST00000420331 213 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 AC004975.1-201ENST00000428733 208 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.05□□□□□ -1.92
SHFQ7M4L6 NEK4P1-201ENST00000433383 879 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 AL512844.2-201ENST00000433990 593 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.05□□□□□ -1.92
SHFQ7M4L6 AC098614.3-201ENST00000438957 440 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 HMGB3P11-201ENST00000440127 604 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 AL360271.2-201ENST00000447710 161 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.05□□□□□ -1.92
SHFQ7M4L6 RNU6-1208P-201ENST00000459588 107 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 RPS15AP34-201ENST00000487776 387 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 RN7SL283P-201ENST00000489055 303 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 HMGN1P12-201ENST00000499125 195 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.05□□□□□ -1.92
SHFQ7M4L6 RNU6-507P-201ENST00000516045 100 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 RNU2-69P-201ENST00000516061 100 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 RNU6-143P-201ENST00000516942 93 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 RPL7P20-201ENST00000520308 745 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.05□□□□□ -1.92
SHFQ7M4L6 OR11H5P-201ENST00000554039 926 ntBASIC3.05□□□□□ -1.92
SHFQ7M4L6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.05□□□□□ -1.92
SHFQ7M4L6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.05□□□□□ -1.92
SHFQ7M4L6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHFQ7M4L6 AC027309.3-201ENST00000623419 351 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms