Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 C1DP2-201ENST00000418167 426 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 NUP35P1-201ENST00000422734 947 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC010975.2-201ENST00000427781 588 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 USP9YP14-201ENST00000430663 563 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 USP9YP15-201ENST00000442391 422 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 MTCO3P45-201ENST00000443036 613 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 MTND2P33-201ENST00000506452 1031 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 NDUFB4P2-201ENST00000509515 391 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC091133.4-201ENST00000511142 308 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 SNORA18.6-201ENST00000516792 115 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 MTCO2P4-201ENST00000517968 247 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 MIR4319-201ENST00000577285 85 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 MIR4672-201ENST00000583126 81 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC105224.1-201ENST00000587055 421 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC078795.2-201ENST00000602835 1252 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC004067.1-201ENST00000608733 700 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC006566.1-201ENST00000608943 513 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC103710.2-201ENST00000609912 942 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 Z99129.1-201ENST00000612510 255 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC005332.10-201ENST00000612725 619 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC090740.1-201ENST00000623193 2262 ntBASIC2.41□□□□□ -2.02
ZNF544Q6NX49 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
ZNF544Q6NX49 AC135776.4-201ENST00000624300 1904 ntBASIC2.4□□□□□ -2.02
ZNF544Q6NX49 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
ZNF544Q6NX49 AC062016.1-201ENST00000355719 319 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RNU5E-1-201ENST00000362477 120 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RNU6-1284P-201ENST00000363701 100 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RNY4P16-201ENST00000364768 94 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 Y_RNA.582-201ENST00000391023 95 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AL360182.1-201ENST00000397433 468 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 MRPL42P2-201ENST00000403169 426 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RNU2-62P-201ENST00000410868 191 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RNA5SP21-201ENST00000410917 96 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC073614.1-201ENST00000438690 650 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RPS12P2-201ENST00000439728 269 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 DNAJC19P4-201ENST00000440115 345 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 ELOCP30-201ENST00000447108 299 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 MTCYBP1-201ENST00000454315 1119 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RPS15AP36-201ENST00000492022 382 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC010587.1-201ENST00000505809 469 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RPL37P25-201ENST00000507308 276 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RN7SKP298-201ENST00000515950 94 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RN7SKP132-201ENST00000516001 208 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RNU6-64P-201ENST00000517119 105 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 PRELID2P1-201ENST00000552837 301 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 CYCSP39-201ENST00000565821 309 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC010546.1-201ENST00000569391 485 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 MIR3921-201ENST00000577308 85 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AL035413.2-201ENST00000604801 525 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC087241.4-201ENST00000612441 480 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC013476.2-201ENST00000614456 459 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC099842.1-201ENST00000619919 596 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AL359740.1-201ENST00000624340 592 ntBASIC2.4□□□□□ -2.03
ZNF544Q6NX49 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
ZNF544Q6NX49 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.39□□□□□ -2.03
ZNF544Q6NX49 SNORA23-201ENST00000365128 182 ntBASIC2.39□□□□□ -2.03
ZNF544Q6NX49 RNY3P13-201ENST00000365542 102 ntBASIC2.39□□□□□ -2.03
ZNF544Q6NX49 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
ZNF544Q6NX49 SNORA1.3-201ENST00000384676 136 ntBASIC2.39□□□□□ -2.03
ZNF544Q6NX49 MIR144-201ENST00000384886 86 ntBASIC2.39□□□□□ -2.03
ZNF544Q6NX49 AL138827.1-201ENST00000402666 306 ntBASIC2.39□□□□□ -2.03
ZNF544Q6NX49 AL359634.1-202ENST00000404721 284 ntBASIC2.39□□□□□ -2.03
ZNF544Q6NX49 ELOCP17-201ENST00000414751 326 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms