Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PRPF40BQ6NWY9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-26P-201ENST00000383985 107 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 Y_RNA.424-201ENST00000384063 103 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-55P-201ENST00000411092 107 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 RPS15AP6-201ENST00000420703 385 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 AC068781.1-201ENST00000488231 618 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 SNORA31.3-201ENST00000516029 96 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-914P-201ENST00000516749 109 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 HSBP1P1-201ENST00000555205 166 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 AC087499.8-201ENST00000578406 226 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 MIR548AC-201ENST00000585049 88 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 AC104695.3-201ENST00000604052 296 ntBASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF40BQ6NWY9 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 Y_RNA.151-201ENST00000363566 112 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-450P-201ENST00000364654 107 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 SNORA41-201ENST00000384675 132 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 Y_RNA.556-201ENST00000384677 113 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 MIR34B-201ENST00000385076 84 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 MIR513A2-201ENST00000385249 127 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 RNU2-23P-201ENST00000410545 195 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-847P-201ENST00000411115 108 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 SYF2P2-201ENST00000417620 583 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 HMGB1P9-201ENST00000429856 646 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 HMGB1P12-201ENST00000438594 598 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 PCMTD1P1-201ENST00000455560 355 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 RPS15AP34-201ENST00000487776 387 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 VN1R104P-201ENST00000505115 1009 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 AC005951.2-201ENST00000576282 495 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 AL160281.1-201ENST00000605307 311 ntBASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF40BQ6NWY9 AC011266.1-201ENST00000624119 3569 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-1329P-201ENST00000365664 107 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-790P-201ENST00000384479 105 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 Y_RNA.645-201ENST00000391229 102 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 RPL21P17-201ENST00000397467 475 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AC243428.1-201ENST00000421099 264 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AC073063.1-201ENST00000434352 607 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 RPL9P32-201ENST00000464118 620 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 RNU6-475P-201ENST00000516073 104 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 SNORA31.22-201ENST00000517204 135 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 SNRPGP16-201ENST00000533275 226 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AL121603.1-201ENST00000553815 142 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 RNA5SP108-201ENST00000605921 117 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AC015967.1-201ENST00000619893 476 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AL031601.2-202ENST00000622650 282 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AC032011.1-201ENST00000611703 1549 ntBASIC5□□□□□ -1.61
PRPF40BQ6NWY9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF40BQ6NWY9 AC091812.1-201ENST00000432235 1948 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms