Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AC093752.1-206ENST00000511823 336 ntBASIC1.1□□□□□ -2.23
CCDC18Q5T9S5 AC104997.1-201ENST00000519761 717 ntBASIC1.1□□□□□ -2.23
CCDC18Q5T9S5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC18Q5T9S5 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
CCDC18Q5T9S5 MIR924-201ENST00000638017 53 ntBASIC1.1□□□□□ -2.23
CCDC18Q5T9S5 TPTE2P4-201ENST00000258589 1605 ntBASIC1.09□□□□□ -2.23
CCDC18Q5T9S5 MTND4P31-201ENST00000425607 1343 ntBASIC1.09□□□□□ -2.23
CCDC18Q5T9S5 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 SNORA22-201ENST00000383907 134 ntBASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 SNORA70.7-201ENST00000384159 133 ntBASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 SNORA22C-201ENST00000384614 134 ntBASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 AC092393.1-201ENST00000439625 742 ntBASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 MED28P6-201ENST00000558776 231 ntBASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 AC090132.2-201ENST00000615881 347 ntBASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 AL136313.1-201ENST00000624804 202 ntBASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
CCDC18Q5T9S5 AL589743.1-201ENST00000551932 2712 ntBASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 NACAP2-201ENST00000318548 624 ntBASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 RNA5SP125-201ENST00000364843 120 ntBASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 RNU1-78P-201ENST00000391248 165 ntBASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 CR848007.2-201ENST00000424918 787 ntBASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 RPS20P20-201ENST00000460498 340 ntBASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 AC004812.1-201ENST00000540773 146 ntBASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 AC021646.1-201ENST00000605469 484 ntBASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 AL109933.3-201ENST00000619095 188 ntBASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.08□□□□□ -2.24
CCDC18Q5T9S5 AC016716.1-201ENST00000265882 708 ntBASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 RNU6-374P-201ENST00000364146 108 ntBASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 SNORD26-201ENST00000384147 75 ntBASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 MIR936-201ENST00000401264 98 ntBASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 MIR3198-2-201ENST00000577868 80 ntBASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 AL078605.1-201ENST00000603529 500 ntBASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 DUSP12P1-201ENST00000612874 516 ntBASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 MIR6866-201ENST00000638146 69 ntBASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC18Q5T9S5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 RNU6-1074P-201ENST00000383995 104 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 EDDM3CP-201ENST00000415977 425 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 AC092573.2-201ENST00000434546 243 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 JTBP1-201ENST00000441314 247 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 AC117454.1-201ENST00000491120 168 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 AC105313.1-201ENST00000509121 353 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 MIR3126-201ENST00000577443 74 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 MIR4713-201ENST00000582691 75 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 BNIP3P25-201ENST00000596023 559 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 MIR8087-201ENST00000612745 78 ntBASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC18Q5T9S5 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 RNU4-23P-201ENST00000362839 140 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 Y_RNA.433-201ENST00000384089 102 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 PTENP1-201ENST00000447117 1215 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AC139453.3-201ENST00000493276 369 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AC103851.1-201ENST00000506833 274 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 RNA5SP121-201ENST00000516537 101 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AC011260.1-201ENST00000578420 472 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AC103810.8-201ENST00000607347 118 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AP003400.5-201ENST00000624827 617 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 OR4G2P-201ENST00000328113 903 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 SNORA8-201ENST00000384574 139 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 GTF2IP20-201ENST00000431663 360 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 TPTE2P6-202ENST00000445572 1007 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AC112198.4-201ENST00000515450 351 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 RNA5SP476-201ENST00000516613 103 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 RNU6-362P-201ENST00000516736 90 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AL133241.1-201ENST00000556832 487 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AC091925.1-201ENST00000623204 462 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AC022513.1-201ENST00000624512 117 ntBASIC1.05□□□□□ -2.24
CCDC18Q5T9S5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC18Q5T9S5 C1DP3-201ENST00000455013 423 ntBASIC1.04□□□□□ -2.24
CCDC18Q5T9S5 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC18Q5T9S5 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC18Q5T9S5 SNORA70.16-201ENST00000516390 95 ntBASIC1.04□□□□□ -2.24
CCDC18Q5T9S5 SNORA48.11-201ENST00000517015 89 ntBASIC1.04□□□□□ -2.24
CCDC18Q5T9S5 AC005786.1-201ENST00000588553 154 ntBASIC1.04□□□□□ -2.24
CCDC18Q5T9S5 GAS5-AS1-201ENST00000602767 694 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms