Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 HMGB1P27-201ENST00000431429 603 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.74□□□□□ -1.97
GABPAQ06546 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.74□□□□□ -1.97
GABPAQ06546 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.74□□□□□ -1.97
GABPAQ06546 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.74□□□□□ -1.97
GABPAQ06546 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.74□□□□□ -1.97
GABPAQ06546 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.74□□□□□ -1.97
GABPAQ06546 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.74□□□□□ -1.97
GABPAQ06546 AC013267.1-201ENST00000458227 267 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 RPL37P6-201ENST00000460682 294 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 RBM43P1-201ENST00000476891 1081 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 RPL23AP49-201ENST00000492925 468 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 ARL2BPP2-201ENST00000550907 489 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 MIR1273D-201ENST00000577266 86 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 AC008088.1-201ENST00000580993 280 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.74□□□□□ -1.97
GABPAQ06546 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
GABPAQ06546 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
GABPAQ06546 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.74□□□□□ -1.97
GABPAQ06546 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.73□□□□□ -1.97
GABPAQ06546 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
GABPAQ06546 RNU6-1167P-201ENST00000363227 94 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 RNU1-73P-201ENST00000383971 164 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 SNORA26.8-201ENST00000391306 124 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 RPL21P75-201ENST00000396599 483 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
GABPAQ06546 RPL21P28-201ENST00000401418 483 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AL592114.1-201ENST00000403842 483 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 RNU2-36P-201ENST00000410361 191 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 Y_RNA.598-201ENST00000410480 95 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 NPM1P11-201ENST00000417106 855 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 CYCSP46-201ENST00000423569 204 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 RAC1P6-201ENST00000423911 575 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.73□□□□□ -1.97
GABPAQ06546 AC119618.1-201ENST00000434191 222 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 RPL36AP6-201ENST00000435770 321 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AL714022.1-201ENST00000439897 151 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 RPL23AP58-201ENST00000440453 469 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 CECR9-201ENST00000453421 199 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AC087588.1-201ENST00000462203 316 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 RPL21P39-201ENST00000463605 483 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 RPL21P93-201ENST00000480465 489 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AC087190.1-201ENST00000484462 480 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AC093591.1-201ENST00000491435 481 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 RPL21P16-201ENST00000495531 483 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AC010587.1-201ENST00000505809 469 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.73□□□□□ -1.97
GABPAQ06546 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.73□□□□□ -1.97
GABPAQ06546 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.73□□□□□ -1.97
GABPAQ06546 FABP5P5-201ENST00000515537 406 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AC087373.1-201ENST00000524920 491 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.73□□□□□ -1.97
GABPAQ06546 HMGN1P30-201ENST00000589286 268 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.73□□□□□ -1.97
GABPAQ06546 FTX_3.1-201ENST00000610451 147 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AC138749.5-201ENST00000611461 208 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AC034102.8-201ENST00000615146 484 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AC116165.2-201ENST00000616705 206 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 AC092140.2-201ENST00000618027 521 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.73□□□□□ -1.97
GABPAQ06546 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
GABPAQ06546 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
GABPAQ06546 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
GABPAQ06546 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
GABPAQ06546 AC022336.2-201ENST00000568966 2538 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
GABPAQ06546 UBE2L2-201ENST00000254302 429 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
GABPAQ06546 RNU6-512P-201ENST00000364438 103 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
GABPAQ06546 AL139397.2-201ENST00000404529 772 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 AL021407.1-201ENST00000404531 386 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.72□□□□□ -1.97
GABPAQ06546 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.72□□□□□ -1.97
GABPAQ06546 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.72□□□□□ -1.97
GABPAQ06546 AL589872.1-201ENST00000426602 288 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 AC104651.1-201ENST00000427559 735 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.72□□□□□ -1.97
GABPAQ06546 NEFMP1-201ENST00000443423 1006 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 SNORD97-201ENST00000459187 142 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 RPS29P12-201ENST00000460178 152 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 RAC1P5-201ENST00000512182 576 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 RNU2-10P-201ENST00000516375 211 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
GABPAQ06546 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.72□□□□□ -1.97
GABPAQ06546 AC060788.1-201ENST00000521318 469 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 AP006587.4-201ENST00000526053 529 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 SNRPGP18-201ENST00000553000 214 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.72□□□□□ -1.97
GABPAQ06546 AC026464.5-201ENST00000562497 722 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 BNIP3P8-201ENST00000597863 560 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 AC121247.2-201ENST00000604776 136 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 MTND4LP5-201ENST00000605152 292 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 AC004805.2-201ENST00000605382 482 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.72□□□□□ -1.97
GABPAQ06546 AC103710.2-201ENST00000609912 942 ntBASIC2.72□□□□□ -1.97
GABPAQ06546 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
GABPAQ06546 AC004852.3-201ENST00000614131 326 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms