Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TRBV1-201ENST00000476502 284 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 RPL31P41-201ENST00000477967 372 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
RHBDL3P58872 RNU6-445P-201ENST00000516949 107 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.72□□□□□ -1.81
RHBDL3P58872 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.72□□□□□ -1.81
RHBDL3P58872 AC022080.3-201ENST00000544433 482 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDL3P58872 AC024909.2-201ENST00000553035 286 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDL3P58872 AC007151.1-201ENST00000572774 483 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 AL022154.1-201ENST00000604698 785 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 AC024940.5-201ENST00000622889 474 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDL3P58872 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDL3P58872 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDL3P58872 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RHBDL3P58872 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RHBDL3P58872 RNU2-49P-201ENST00000410666 184 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 RNU6-55P-201ENST00000411092 107 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 RNU6-954P-201ENST00000411355 107 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 AC023141.4-201ENST00000412031 328 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 AL160275.3-201ENST00000423876 471 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.71□□□□□ -1.82
RHBDL3P58872 AC107083.1-201ENST00000439643 279 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 AL078601.1-201ENST00000444542 271 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 NIPA2P5-201ENST00000452282 464 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 EIF4EP3-201ENST00000498782 656 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.71□□□□□ -1.82
RHBDL3P58872 SNORD27.1-201ENST00000516319 72 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 RNU6-572P-201ENST00000516724 80 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 SNORA31.26-201ENST00000517250 137 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.71□□□□□ -1.82
RHBDL3P58872 MTCYBP20-201ENST00000524239 1129 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.71□□□□□ -1.82
RHBDL3P58872 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.71□□□□□ -1.82
RHBDL3P58872 AP005136.1-201ENST00000579765 429 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.71□□□□□ -1.82
RHBDL3P58872 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.71□□□□□ -1.82
RHBDL3P58872 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.71□□□□□ -1.82
RHBDL3P58872 AP001486.3-201ENST00000615334 372 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 AC002064.3-201ENST00000623448 346 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 SEPT14P19-203ENST00000633205 211 ntBASIC3.71□□□□□ -1.82
RHBDL3P58872 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RHBDL3P58872 RNU6-74P-201ENST00000384235 107 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 RNU6-1119P-201ENST00000384349 108 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 Y_RNA.510-201ENST00000384511 114 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 SNORD15B-201ENST00000384714 146 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 SNORD67-201ENST00000390833 111 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 UBE2V1P2-201ENST00000397758 440 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 RNA5SP111-201ENST00000411386 101 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AL663109.1-201ENST00000411498 844 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.7□□□□□ -1.82
RHBDL3P58872 RPL7P10-201ENST00000417407 739 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 COTL1P1-201ENST00000422309 375 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.7□□□□□ -1.82
RHBDL3P58872 AC004801.2-202ENST00000463559 283 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 RPS3AP17-201ENST00000472594 777 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.7□□□□□ -1.82
RHBDL3P58872 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.7□□□□□ -1.82
RHBDL3P58872 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.7□□□□□ -1.82
RHBDL3P58872 RNU6-1183P-201ENST00000517054 60 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 SNORA31.19-201ENST00000517079 126 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AC009812.2-201ENST00000517657 457 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AC025755.1-201ENST00000521306 278 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.7□□□□□ -1.82
RHBDL3P58872 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RHBDL3P58872 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.7□□□□□ -1.82
RHBDL3P58872 AC021739.1-201ENST00000559631 174 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.7□□□□□ -1.82
RHBDL3P58872 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AC007938.3-201ENST00000604965 623 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AC080013.6-201ENST00000606185 215 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AC092656.1-203ENST00000624134 423 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 LRRC77P-213ENST00000637727 880 ntBASIC3.7□□□□□ -1.82
RHBDL3P58872 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.7□□□□□ -1.82
RHBDL3P58872 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RHBDL3P58872 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.7□□□□□ -1.82
RHBDL3P58872 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RHBDL3P58872 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDL3P58872 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDL3P58872 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDL3P58872 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.69□□□□□ -1.82
RHBDL3P58872 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDL3P58872 Y_RNA.582-201ENST00000391023 95 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDL3P58872 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDL3P58872 CISD1P1-201ENST00000393907 327 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 AC007560.1-201ENST00000426912 237 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDL3P58872 OSTCP8-201ENST00000445117 448 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 AC132479.1-201ENST00000449160 144 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 RPS27P29-201ENST00000463110 252 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 RPS29P26-201ENST00000477483 171 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 AC079382.1-201ENST00000493346 557 ntBASIC3.69□□□□□ -1.82
RHBDL3P58872 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDL3P58872 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms