Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.4□□□□□ -2.34
HTTP42858 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.4□□□□□ -2.34
HTTP42858 AC090616.3-201ENST00000582184 217 ntBASIC0.4□□□□□ -2.34
HTTP42858 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.34
HTTP42858 AP000776.1-201ENST00000530032 1663 ntBASIC0.4□□□□□ -2.35
HTTP42858 Y_RNA.185-201ENST00000363894 100 ntBASIC0.4□□□□□ -2.35
HTTP42858 SNORA51.6-201ENST00000384151 125 ntBASIC0.4□□□□□ -2.35
HTTP42858 RNA5SP450-201ENST00000411206 102 ntBASIC0.4□□□□□ -2.35
HTTP42858 ARL2BPP3-201ENST00000421226 480 ntBASIC0.4□□□□□ -2.35
HTTP42858 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
HTTP42858 RPL23AP6-201ENST00000446637 472 ntBASIC0.4□□□□□ -2.35
HTTP42858 Y_RNA.654-201ENST00000497848 106 ntBASIC0.4□□□□□ -2.35
HTTP42858 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
HTTP42858 SNORA14.1-201ENST00000516113 141 ntBASIC0.4□□□□□ -2.35
HTTP42858 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.4□□□□□ -2.35
HTTP42858 COX6CP3-201ENST00000580869 223 ntBASIC0.4□□□□□ -2.35
HTTP42858 MIR3117-201ENST00000584034 78 ntBASIC0.4□□□□□ -2.35
HTTP42858 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
HTTP42858 RN7SKP158-201ENST00000410453 326 ntBASIC0.4□□□□□ -2.35
HTTP42858 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.4□□□□□ -2.35
HTTP42858 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.4□□□□□ -2.35
HTTP42858 MTND5P8-201ENST00000449817 1083 ntBASIC0.4□□□□□ -2.35
HTTP42858 CLIC4P1-201ENST00000453177 535 ntBASIC0.4□□□□□ -2.35
HTTP42858 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
HTTP42858 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.4□□□□□ -2.35
HTTP42858 VN1R84P-201ENST00000593697 235 ntBASIC0.4□□□□□ -2.35
HTTP42858 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
HTTP42858 Y_RNA.453-201ENST00000384223 109 ntBASIC0.39□□□□□ -2.35
HTTP42858 MIR32-201ENST00000384965 70 ntBASIC0.39□□□□□ -2.35
HTTP42858 AL133384.1-201ENST00000412744 351 ntBASIC0.39□□□□□ -2.35
HTTP42858 MTND4LP13-201ENST00000425022 298 ntBASIC0.39□□□□□ -2.35
HTTP42858 AL353689.1-201ENST00000438895 199 ntBASIC0.39□□□□□ -2.35
HTTP42858 EIF4EP3-201ENST00000498782 656 ntBASIC0.39□□□□□ -2.35
HTTP42858 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.39□□□□□ -2.35
HTTP42858 AC008739.2-201ENST00000597006 317 ntBASIC0.39□□□□□ -2.35
HTTP42858 SNORA38-201ENST00000363946 132 ntBASIC0.39□□□□□ -2.35
HTTP42858 AL356776.1-201ENST00000406574 447 ntBASIC0.39□□□□□ -2.35
HTTP42858 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.39□□□□□ -2.35
HTTP42858 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.39□□□□□ -2.35
HTTP42858 SNORA31.18-201ENST00000517043 134 ntBASIC0.39□□□□□ -2.35
HTTP42858 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.39□□□□□ -2.35
HTTP42858 RNU1-96P-201ENST00000364163 162 ntBASIC0.38□□□□□ -2.35
HTTP42858 UBE2FP1-201ENST00000416536 447 ntBASIC0.38□□□□□ -2.35
HTTP42858 CABYRP1-201ENST00000465493 1045 ntBASIC0.38□□□□□ -2.35
HTTP42858 AC055731.1-201ENST00000474387 401 ntBASIC0.38□□□□□ -2.35
HTTP42858 AP001180.6-201ENST00000584918 159 ntBASIC0.38□□□□□ -2.35
HTTP42858 SNRPFP2-201ENST00000440710 251 ntBASIC0.38□□□□□ -2.35
HTTP42858 AC027575.1-201ENST00000481064 460 ntBASIC0.38□□□□□ -2.35
HTTP42858 RNA5SP67-201ENST00000516422 131 ntBASIC0.38□□□□□ -2.35
HTTP42858 AC021146.2-201ENST00000504736 556 ntBASIC0.38□□□□□ -2.35
HTTP42858 AC093770.1-201ENST00000511559 571 ntBASIC0.38□□□□□ -2.35
HTTP42858 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.38□□□□□ -2.35
HTTP42858 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.38□□□□□ -2.35
HTTP42858 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
HTTP42858 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
HTTP42858 CCT4P2-201ENST00000233836 1548 ntBASIC0.37□□□□□ -2.35
HTTP42858 RNU6-733P-201ENST00000410759 104 ntBASIC0.37□□□□□ -2.35
HTTP42858 SFR1P2-201ENST00000421841 730 ntBASIC0.37□□□□□ -2.35
HTTP42858 TMEM167AP1-201ENST00000423409 219 ntBASIC0.37□□□□□ -2.35
HTTP42858 MTATP6P7-201ENST00000453315 681 ntBASIC0.37□□□□□ -2.35
HTTP42858 RPL30P14-201ENST00000482744 348 ntBASIC0.37□□□□□ -2.35
HTTP42858 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.37□□□□□ -2.35
HTTP42858 MTCO2P32-201ENST00000514865 403 ntBASIC0.37□□□□□ -2.35
HTTP42858 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.37□□□□□ -2.35
HTTP42858 ERHP1-201ENST00000523006 310 ntBASIC0.37□□□□□ -2.35
HTTP42858 AC087272.1-201ENST00000523624 533 ntBASIC0.37□□□□□ -2.35
HTTP42858 MIR4529-201ENST00000578110 78 ntBASIC0.37□□□□□ -2.35
HTTP42858 AC008083.4-201ENST00000615076 444 ntBASIC0.37□□□□□ -2.35
HTTP42858 RNU6-112P-201ENST00000363599 104 ntBASIC0.37□□□□□ -2.35
HTTP42858 RNU6-923P-201ENST00000364753 107 ntBASIC0.37□□□□□ -2.35
HTTP42858 SNORA14A-201ENST00000364773 135 ntBASIC0.37□□□□□ -2.35
HTTP42858 MIR627-201ENST00000384979 97 ntBASIC0.37□□□□□ -2.35
HTTP42858 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.37□□□□□ -2.35
HTTP42858 snoU109.1-201ENST00000459339 135 ntBASIC0.37□□□□□ -2.35
HTTP42858 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.37□□□□□ -2.35
HTTP42858 SNORD39.2-201ENST00000579995 76 ntBASIC0.37□□□□□ -2.35
HTTP42858 AC090616.5-202ENST00000582111 297 ntBASIC0.37□□□□□ -2.35
HTTP42858 AC012254.4-201ENST00000588843 273 ntBASIC0.37□□□□□ -2.35
HTTP42858 AC135507.1-201ENST00000607214 561 ntBASIC0.37□□□□□ -2.35
HTTP42858 AL121890.5-201ENST00000620848 304 ntBASIC0.37□□□□□ -2.35
HTTP42858 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.37□□□□□ -2.35
HTTP42858 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
HTTP42858 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.36□□□□□ -2.35
HTTP42858 AC121333.1-201ENST00000567488 2709 ntBASIC0.36□□□□□ -2.35
HTTP42858 RNY4P24-201ENST00000362735 96 ntBASIC0.36□□□□□ -2.35
HTTP42858 RNU2-71P-201ENST00000411395 189 ntBASIC0.36□□□□□ -2.35
HTTP42858 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
HTTP42858 AL121839.1-201ENST00000556233 1185 ntBASIC0.36□□□□□ -2.35
HTTP42858 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.36□□□□□ -2.35
HTTP42858 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.36□□□□□ -2.35
HTTP42858 AC106791.2-201ENST00000604680 391 ntBASIC0.36□□□□□ -2.35
HTTP42858 AC104763.3-201ENST00000613765 618 ntBASIC0.36□□□□□ -2.35
HTTP42858 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.36□□□□□ -2.35
HTTP42858 AC109454.4-201ENST00000623411 649 ntBASIC0.36□□□□□ -2.35
HTTP42858 RNU6-600P-201ENST00000362524 99 ntBASIC0.36□□□□□ -2.35
HTTP42858 RNU6-1072P-201ENST00000384703 107 ntBASIC0.36□□□□□ -2.35
HTTP42858 RNU6-443P-201ENST00000384780 107 ntBASIC0.36□□□□□ -2.35
HTTP42858 MIR92A2-201ENST00000385299 75 ntBASIC0.36□□□□□ -2.35
HTTP42858 RPS3AP36-201ENST00000398190 775 ntBASIC0.36□□□□□ -2.35
HTTP42858 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms