Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 ELOCP30-201ENST00000447108 299 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.07□□□□□ -2.08
BRCA1P38398 RNU6-714P-201ENST00000516963 103 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.07□□□□□ -2.08
BRCA1P38398 AL161670.1-201ENST00000554348 137 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 AL355877.2-201ENST00000603670 358 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 MIR6895-201ENST00000613497 78 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
BRCA1P38398 AC092447.10-201ENST00000620607 1652 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.07□□□□□ -2.08
BRCA1P38398 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.07□□□□□ -2.08
BRCA1P38398 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 SUMO1P4-201ENST00000429430 302 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 AC002381.1-201ENST00000447049 280 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 AC113155.1-201ENST00000511141 769 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 RN7SKP258-201ENST00000517151 304 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 NRON-201ENST00000517270 370 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 AC104581.2-201ENST00000572227 430 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.07□□□□□ -2.08
BRCA1P38398 MIR3117-201ENST00000584034 78 ntBASIC2.07□□□□□ -2.08
BRCA1P38398 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.06□□□□□ -2.08
BRCA1P38398 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
BRCA1P38398 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
BRCA1P38398 SNORA40.4-201ENST00000390971 128 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 RNU6-1000P-201ENST00000391066 106 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.06□□□□□ -2.08
BRCA1P38398 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.06□□□□□ -2.08
BRCA1P38398 AL590383.1-201ENST00000428602 75 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 AC114981.1-201ENST00000503897 678 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.06□□□□□ -2.08
BRCA1P38398 RPPH1-2P-201ENST00000516688 293 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 SNORA31.18-201ENST00000517043 134 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 RNA5SP290-201ENST00000517133 127 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 BTF3P12-201ENST00000519620 469 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.06□□□□□ -2.08
BRCA1P38398 AC087465.1-201ENST00000560574 245 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.06□□□□□ -2.08
BRCA1P38398 AL357094.1-201ENST00000603845 844 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 AC024060.1-201ENST00000607052 494 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
BRCA1P38398 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 AC079416.3-201ENST00000624479 549 ntBASIC2.06□□□□□ -2.08
BRCA1P38398 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.06□□□□□ -2.08
BRCA1P38398 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
BRCA1P38398 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
BRCA1P38398 AC007785.2-201ENST00000598627 1916 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 RNU5E-8P-201ENST00000363502 116 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 RNA5SP240-201ENST00000365355 128 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 MIR1305-201ENST00000408300 86 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 AC083875.1-201ENST00000419509 405 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 AL139421.1-201ENST00000423010 169 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 SNRPEP7-201ENST00000438350 220 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.05□□□□□ -2.08
BRCA1P38398 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.05□□□□□ -2.08
BRCA1P38398 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.05□□□□□ -2.08
BRCA1P38398 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.05□□□□□ -2.08
BRCA1P38398 AP1S2P1-201ENST00000457344 379 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.05□□□□□ -2.08
BRCA1P38398 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.05□□□□□ -2.08
BRCA1P38398 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
BRCA1P38398 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
BRCA1P38398 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.05□□□□□ -2.08
BRCA1P38398 AL132857.1-201ENST00000555180 708 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.05□□□□□ -2.08
BRCA1P38398 uc_338.14-201ENST00000613162 166 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.05□□□□□ -2.08
BRCA1P38398 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
BRCA1P38398 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.05□□□□□ -2.08
BRCA1P38398 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
BRCA1P38398 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 RNU6-289P-201ENST00000364093 107 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 MTCYBP38-201ENST00000417160 1123 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 MTCYBP3-201ENST00000445588 1137 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.05□□□□□ -2.08
BRCA1P38398 MRPS17P3-201ENST00000465453 385 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 LARP1BP2-201ENST00000486594 519 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 RPS29P20-201ENST00000489592 171 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.05□□□□□ -2.08
BRCA1P38398 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.05□□□□□ -2.08
BRCA1P38398 MIR3199-1-201ENST00000582434 88 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.05□□□□□ -2.08
BRCA1P38398 AL592221.1-201ENST00000605266 382 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 AC092574.1-201ENST00000609771 420 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
BRCA1P38398 U2.21-201ENST00000637295 81 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 AC006927.4-201ENST00000639187 543 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 CCT4P2-201ENST00000233836 1548 ntBASIC2.05□□□□□ -2.08
BRCA1P38398 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
BRCA1P38398 Y_RNA.245-201ENST00000364493 95 ntBASIC2.04□□□□□ -2.08
BRCA1P38398 RNU6-224P-201ENST00000384055 107 ntBASIC2.04□□□□□ -2.08
BRCA1P38398 DHFRP6-201ENST00000401776 268 ntBASIC2.04□□□□□ -2.08
BRCA1P38398 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.04□□□□□ -2.08
BRCA1P38398 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.04□□□□□ -2.08
BRCA1P38398 AC104982.1-201ENST00000478775 574 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms