Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
HMGCLP35914 CR848007.1-201ENST00000442354 1699 ntBASIC2.57□□□□□ -2
HMGCLP35914 OR4G2P-202ENST00000641004 1759 ntBASIC2.56□□□□□ -2
HMGCLP35914 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HMGCLP35914 HSPE1P11-201ENST00000339579 310 ntBASIC2.56□□□□□ -2
HMGCLP35914 RNA5SP393-201ENST00000363423 117 ntBASIC2.56□□□□□ -2
HMGCLP35914 RNU5E-6P-201ENST00000365574 115 ntBASIC2.56□□□□□ -2
HMGCLP35914 RNU6-14P-201ENST00000384630 106 ntBASIC2.56□□□□□ -2
HMGCLP35914 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
HMGCLP35914 RNU6-278P-201ENST00000390945 109 ntBASIC2.56□□□□□ -2
HMGCLP35914 RNA5SP210-201ENST00000391034 120 ntBASIC2.56□□□□□ -2
HMGCLP35914 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HMGCLP35914 DEFB108C-201ENST00000400154 252 ntBASIC2.56□□□□□ -2
HMGCLP35914 ELOCP17-201ENST00000414751 326 ntBASIC2.56□□□□□ -2
HMGCLP35914 MTCO2P34-201ENST00000421994 607 ntBASIC2.56□□□□□ -2
HMGCLP35914 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.56□□□□□ -2
HMGCLP35914 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.56□□□□□ -2
HMGCLP35914 AC009237.8-201ENST00000445492 379 ntBASIC2.56□□□□□ -2
HMGCLP35914 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.56□□□□□ -2
HMGCLP35914 AC010587.1-201ENST00000505809 469 ntBASIC2.56□□□□□ -2
HMGCLP35914 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.56□□□□□ -2
HMGCLP35914 RNU6-1282P-201ENST00000516735 96 ntBASIC2.56□□□□□ -2
HMGCLP35914 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.56□□□□□ -2
HMGCLP35914 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.56□□□□□ -2
HMGCLP35914 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.56□□□□□ -2
HMGCLP35914 AC093012.1-202ENST00000549403 582 ntBASIC2.56□□□□□ -2
HMGCLP35914 ARL2BPP2-201ENST00000550907 489 ntBASIC2.56□□□□□ -2
HMGCLP35914 MIR3167-201ENST00000579623 85 ntBASIC2.56□□□□□ -2
HMGCLP35914 MIR3682-201ENST00000581338 84 ntBASIC2.56□□□□□ -2
HMGCLP35914 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.56□□□□□ -2
HMGCLP35914 NRBF2P1-201ENST00000587407 859 ntBASIC2.56□□□□□ -2
HMGCLP35914 AF038458.1-201ENST00000588406 262 ntBASIC2.56□□□□□ -2
HMGCLP35914 AC008739.2-201ENST00000597006 317 ntBASIC2.56□□□□□ -2
HMGCLP35914 AP000860.1-201ENST00000605250 559 ntBASIC2.56□□□□□ -2
HMGCLP35914 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.56□□□□□ -2
HMGCLP35914 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.56□□□□□ -2
HMGCLP35914 MTND1P37-201ENST00000636562 264 ntBASIC2.56□□□□□ -2
HMGCLP35914 AC022336.2-201ENST00000568966 2538 ntBASIC2.56□□□□□ -2
HMGCLP35914 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HMGCLP35914 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.55□□□□□ -2
HMGCLP35914 RNU6-960P-201ENST00000364056 120 ntBASIC2.55□□□□□ -2
HMGCLP35914 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HMGCLP35914 RNU6-1119P-201ENST00000384349 108 ntBASIC2.55□□□□□ -2
HMGCLP35914 MIR196B-201ENST00000384852 84 ntBASIC2.55□□□□□ -2
HMGCLP35914 MIR27B-201ENST00000385129 97 ntBASIC2.55□□□□□ -2
HMGCLP35914 RNU2-33P-201ENST00000410344 192 ntBASIC2.55□□□□□ -2
HMGCLP35914 RNU2-8P-201ENST00000410727 190 ntBASIC2.55□□□□□ -2
HMGCLP35914 BTF3L4P1-201ENST00000413813 468 ntBASIC2.55□□□□□ -2
HMGCLP35914 SPA17P1-201ENST00000416656 452 ntBASIC2.55□□□□□ -2
HMGCLP35914 MORF4L1P6-201ENST00000418771 268 ntBASIC2.55□□□□□ -2
HMGCLP35914 TMEM167AP1-201ENST00000423409 219 ntBASIC2.55□□□□□ -2
HMGCLP35914 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.55□□□□□ -2
HMGCLP35914 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.55□□□□□ -2
HMGCLP35914 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.55□□□□□ -2
HMGCLP35914 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.55□□□□□ -2
HMGCLP35914 AC013267.1-201ENST00000458227 267 ntBASIC2.55□□□□□ -2
HMGCLP35914 RBM43P1-201ENST00000476891 1081 ntBASIC2.55□□□□□ -2
HMGCLP35914 RN7SL432P-201ENST00000484057 298 ntBASIC2.55□□□□□ -2
HMGCLP35914 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.55□□□□□ -2
HMGCLP35914 NDUFB4P2-201ENST00000509515 391 ntBASIC2.55□□□□□ -2
HMGCLP35914 TTC39CP1-201ENST00000512513 755 ntBASIC2.55□□□□□ -2
HMGCLP35914 AP006587.4-201ENST00000526053 529 ntBASIC2.55□□□□□ -2
HMGCLP35914 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.55□□□□□ -2
HMGCLP35914 HMGB1P14-201ENST00000557424 591 ntBASIC2.55□□□□□ -2
HMGCLP35914 TRAV28-201ENST00000557548 323 ntBASIC2.55□□□□□ -2
HMGCLP35914 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.55□□□□□ -2
HMGCLP35914 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
HMGCLP35914 AC010680.1-201ENST00000590024 3590 ntBASIC2.55□□□□□ -2
HMGCLP35914 SEPT7P9-203ENST00000604116 343 ntBASIC2.55□□□□□ -2
HMGCLP35914 HSPE1P7-201ENST00000604681 321 ntBASIC2.55□□□□□ -2
HMGCLP35914 AC010678.1-201ENST00000614118 713 ntBASIC2.55□□□□□ -2
HMGCLP35914 AC099842.1-201ENST00000619919 596 ntBASIC2.55□□□□□ -2
HMGCLP35914 AC027309.3-201ENST00000623419 351 ntBASIC2.55□□□□□ -2
HMGCLP35914 AC135776.4-201ENST00000624300 1904 ntBASIC2.55□□□□□ -2
HMGCLP35914 AC007785.2-201ENST00000598627 1916 ntBASIC2.54□□□□□ -2
HMGCLP35914 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HMGCLP35914 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
HMGCLP35914 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.54□□□□□ -2
HMGCLP35914 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.54□□□□□ -2
HMGCLP35914 RNU6-169P-201ENST00000365336 107 ntBASIC2.54□□□□□ -2
HMGCLP35914 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.54□□□□□ -2
HMGCLP35914 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HMGCLP35914 RNU6-741P-201ENST00000383889 107 ntBASIC2.54□□□□□ -2
HMGCLP35914 RNU1-138P-201ENST00000384093 164 ntBASIC2.54□□□□□ -2
HMGCLP35914 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGCLP35914 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.54□□□□□ -2
HMGCLP35914 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGCLP35914 AC080125.1-201ENST00000414888 684 ntBASIC2.54□□□□□ -2
HMGCLP35914 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.54□□□□□ -2
HMGCLP35914 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.54□□□□□ -2
HMGCLP35914 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.54□□□□□ -2
HMGCLP35914 AC092427.1-202ENST00000430569 476 ntBASIC2.54□□□□□ -2
HMGCLP35914 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.54□□□□□ -2
HMGCLP35914 AC244505.5-201ENST00000443639 207 ntBASIC2.54□□□□□ -2
HMGCLP35914 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.54□□□□□ -2
HMGCLP35914 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGCLP35914 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.54□□□□□ -2
HMGCLP35914 TPTE2P5-203ENST00000458118 728 ntBASIC2.54□□□□□ -2
HMGCLP35914 TPT1P7-201ENST00000458300 517 ntBASIC2.54□□□□□ -2
HMGCLP35914 SNORD97-201ENST00000459187 142 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 206.3 ms