Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 HMGB3P3-201ENST00000510526 400 ntBASIC1.77□□□□□ -2.13
CD28P10747 AC112673.1-201ENST00000513168 575 ntBASIC1.77□□□□□ -2.13
CD28P10747 RNU6-1003P-201ENST00000517099 105 ntBASIC1.77□□□□□ -2.13
CD28P10747 OR5BN1P-201ENST00000532955 829 ntBASIC1.77□□□□□ -2.13
CD28P10747 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.77□□□□□ -2.13
CD28P10747 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.77□□□□□ -2.13
CD28P10747 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.77□□□□□ -2.13
CD28P10747 MIR4307-201ENST00000582802 84 ntBASIC1.77□□□□□ -2.13
CD28P10747 MIR5007-201ENST00000583098 95 ntBASIC1.77□□□□□ -2.13
CD28P10747 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.77□□□□□ -2.13
CD28P10747 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.77□□□□□ -2.13
CD28P10747 AC011458.1-201ENST00000604034 617 ntBASIC1.77□□□□□ -2.13
CD28P10747 AC091965.4-201ENST00000607691 587 ntBASIC1.77□□□□□ -2.13
CD28P10747 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.77□□□□□ -2.13
CD28P10747 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.77□□□□□ -2.13
CD28P10747 AL137847.3-201ENST00000611521 109 ntBASIC1.77□□□□□ -2.13
CD28P10747 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.77□□□□□ -2.13
CD28P10747 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
CD28P10747 AC103706.2-201ENST00000638080 240 ntBASIC1.77□□□□□ -2.13
CD28P10747 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.77□□□□□ -2.13
CD28P10747 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
CD28P10747 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CD28P10747 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CD28P10747 ZNF876P-202ENST00000398732 1485 ntBASIC1.76□□□□□ -2.13
CD28P10747 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.76□□□□□ -2.13
CD28P10747 AC080128.1-201ENST00000474389 1917 ntBASIC1.76□□□□□ -2.13
CD28P10747 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CD28P10747 RNU6-188P-201ENST00000364207 107 ntBASIC1.76□□□□□ -2.13
CD28P10747 Y_RNA.302-201ENST00000364997 102 ntBASIC1.76□□□□□ -2.13
CD28P10747 RNU1-51P-201ENST00000365345 176 ntBASIC1.76□□□□□ -2.13
CD28P10747 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.76□□□□□ -2.13
CD28P10747 RNU6-1083P-201ENST00000384022 107 ntBASIC1.76□□□□□ -2.13
CD28P10747 MIR221-201ENST00000385135 110 ntBASIC1.76□□□□□ -2.13
CD28P10747 AL021407.1-201ENST00000404531 386 ntBASIC1.76□□□□□ -2.13
CD28P10747 MIR1289-2-201ENST00000408360 111 ntBASIC1.76□□□□□ -2.13
CD28P10747 RNU2-68P-201ENST00000410878 191 ntBASIC1.76□□□□□ -2.13
CD28P10747 SEPT2P1-201ENST00000419651 180 ntBASIC1.76□□□□□ -2.13
CD28P10747 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.76□□□□□ -2.13
CD28P10747 AL022400.1-201ENST00000423946 935 ntBASIC1.76□□□□□ -2.13
CD28P10747 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.76□□□□□ -2.13
CD28P10747 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.76□□□□□ -2.13
CD28P10747 TIMM9P1-201ENST00000436122 256 ntBASIC1.76□□□□□ -2.13
CD28P10747 HMGN2P10-201ENST00000448085 265 ntBASIC1.76□□□□□ -2.13
CD28P10747 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.76□□□□□ -2.13
CD28P10747 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.76□□□□□ -2.13
CD28P10747 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.76□□□□□ -2.13
CD28P10747 SNORA31.11-201ENST00000516528 139 ntBASIC1.76□□□□□ -2.13
CD28P10747 SNORA31.18-201ENST00000517043 134 ntBASIC1.76□□□□□ -2.13
CD28P10747 RNA5SP165-201ENST00000517142 115 ntBASIC1.76□□□□□ -2.13
CD28P10747 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.76□□□□□ -2.13
CD28P10747 AP006587.4-201ENST00000526053 529 ntBASIC1.76□□□□□ -2.13
CD28P10747 AC087241.2-201ENST00000535801 324 ntBASIC1.76□□□□□ -2.13
CD28P10747 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.76□□□□□ -2.13
CD28P10747 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.76□□□□□ -2.13
CD28P10747 SNRPGP18-201ENST00000553000 214 ntBASIC1.76□□□□□ -2.13
CD28P10747 MIR4524B-201ENST00000581569 115 ntBASIC1.76□□□□□ -2.13
CD28P10747 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.76□□□□□ -2.13
CD28P10747 BNIP3P23-201ENST00000599655 511 ntBASIC1.76□□□□□ -2.13
CD28P10747 AL645944.1-201ENST00000603857 493 ntBASIC1.76□□□□□ -2.13
CD28P10747 AL358072.1-201ENST00000604156 575 ntBASIC1.76□□□□□ -2.13
CD28P10747 AL355598.1-201ENST00000604169 202 ntBASIC1.76□□□□□ -2.13
CD28P10747 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.76□□□□□ -2.13
CD28P10747 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.76□□□□□ -2.13
CD28P10747 AL136313.1-201ENST00000624804 202 ntBASIC1.76□□□□□ -2.13
CD28P10747 AC110994.2-201ENST00000635481 492 ntBASIC1.76□□□□□ -2.13
CD28P10747 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CD28P10747 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CD28P10747 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CD28P10747 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CD28P10747 Z82209.1-201ENST00000422141 2135 ntBASIC1.75□□□□□ -2.13
CD28P10747 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CD28P10747 UBE2L2-201ENST00000254302 429 ntBASIC1.75□□□□□ -2.13
CD28P10747 AL139276.1-201ENST00000311910 1001 ntBASIC1.75□□□□□ -2.13
CD28P10747 MIRLET7G-201ENST00000362280 84 ntBASIC1.75□□□□□ -2.13
CD28P10747 RNU4-28P-201ENST00000364739 141 ntBASIC1.75□□□□□ -2.13
CD28P10747 SNORA64-201ENST00000384674 134 ntBASIC1.75□□□□□ -2.13
CD28P10747 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.75□□□□□ -2.13
CD28P10747 AF274854.1-201ENST00000413236 615 ntBASIC1.75□□□□□ -2.13
CD28P10747 AL008987.1-201ENST00000415528 237 ntBASIC1.75□□□□□ -2.13
CD28P10747 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.75□□□□□ -2.13
CD28P10747 VPS26BP1-201ENST00000417155 755 ntBASIC1.75□□□□□ -2.13
CD28P10747 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.75□□□□□ -2.13
CD28P10747 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.75□□□□□ -2.13
CD28P10747 AC018634.1-201ENST00000437554 401 ntBASIC1.75□□□□□ -2.13
CD28P10747 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.75□□□□□ -2.13
CD28P10747 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
CD28P10747 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.75□□□□□ -2.13
CD28P10747 AC105252.1-201ENST00000503089 286 ntBASIC1.75□□□□□ -2.13
CD28P10747 AC020699.1-201ENST00000505161 445 ntBASIC1.75□□□□□ -2.13
CD28P10747 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.75□□□□□ -2.13
CD28P10747 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.75□□□□□ -2.13
CD28P10747 SNORA31.6-201ENST00000516241 130 ntBASIC1.75□□□□□ -2.13
CD28P10747 RNU6-201P-201ENST00000517100 61 ntBASIC1.75□□□□□ -2.13
CD28P10747 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.75□□□□□ -2.13
CD28P10747 AP000907.2-201ENST00000530827 353 ntBASIC1.75□□□□□ -2.13
CD28P10747 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.75□□□□□ -2.13
CD28P10747 AL356432.3-201ENST00000568952 465 ntBASIC1.75□□□□□ -2.13
CD28P10747 MYL12BP1-201ENST00000569826 507 ntBASIC1.75□□□□□ -2.13
CD28P10747 AC007151.1-201ENST00000572774 483 ntBASIC1.75□□□□□ -2.13
CD28P10747 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms