Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL2A1P02458 RNU6-845P-201ENST00000362578 103 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 SNORD114-1-201ENST00000362705 72 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 Y_RNA.159-201ENST00000363674 87 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 RNU6-359P-201ENST00000365466 108 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 RNU6-767P-201ENST00000384132 107 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AL079342.1-201ENST00000401460 267 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 RPS20P2-201ENST00000402520 389 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 RNU2-6P-201ENST00000411404 190 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.93□□□□□ -1.94
COL2A1P02458 PIGFP2-201ENST00000421400 651 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.93□□□□□ -1.94
COL2A1P02458 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.93□□□□□ -1.94
COL2A1P02458 MTCO2P12-201ENST00000427426 682 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 TIMM9P3-201ENST00000428659 274 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
COL2A1P02458 FAM103A2P-201ENST00000444122 354 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.93□□□□□ -1.94
COL2A1P02458 AC132479.1-201ENST00000449160 144 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.93□□□□□ -1.94
COL2A1P02458 MTND1P12-201ENST00000455231 147 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.93□□□□□ -1.94
COL2A1P02458 AC103975.1-201ENST00000482506 483 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 HMGB1P29-201ENST00000505659 499 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 MTCO3P9-201ENST00000506989 781 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 RNU6-202P-201ENST00000515998 96 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.93□□□□□ -1.94
COL2A1P02458 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.93□□□□□ -1.94
COL2A1P02458 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.93□□□□□ -1.94
COL2A1P02458 AL355375.2-201ENST00000574825 175 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AC010620.2-201ENST00000600135 313 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.93□□□□□ -1.94
COL2A1P02458 Y_RNA.812-201ENST00000610788 101 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AL132765.2-201ENST00000610812 351 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 Y_RNA.784-201ENST00000613803 101 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 Y_RNA.787-201ENST00000616522 101 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 AC004825.2-201ENST00000616634 455 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 Y_RNA.780-201ENST00000617336 101 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 Y_RNA.801-201ENST00000619005 101 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL2A1P02458 MTND5P3-201ENST00000438536 1800 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL2A1P02458 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.93□□□□□ -1.94
COL2A1P02458 AC080128.1-201ENST00000474389 1917 ntBASIC2.93□□□□□ -1.94
COL2A1P02458 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
COL2A1P02458 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.92□□□□□ -1.94
COL2A1P02458 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL2A1P02458 RNU6-115P-201ENST00000364310 107 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 RNVU1-3-201ENST00000364313 161 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.92□□□□□ -1.94
COL2A1P02458 RNU6-1227P-201ENST00000383981 107 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 Y_RNA.460-201ENST00000384255 102 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 RNU6-952P-201ENST00000391164 108 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
COL2A1P02458 RNU2-9P-201ENST00000410194 145 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 MTCO2P5-201ENST00000422621 426 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 AC007283.2-201ENST00000424739 197 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.92□□□□□ -1.94
COL2A1P02458 AC024082.2-201ENST00000434771 238 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.92□□□□□ -1.94
COL2A1P02458 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.92□□□□□ -1.94
COL2A1P02458 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.92□□□□□ -1.94
COL2A1P02458 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.92□□□□□ -1.94
COL2A1P02458 SNRPGP6-201ENST00000451124 220 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.92□□□□□ -1.94
COL2A1P02458 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.92□□□□□ -1.94
COL2A1P02458 SNRPFP4-201ENST00000456366 242 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 HMGN2P23-201ENST00000456759 269 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 AC092185.1-201ENST00000491371 97 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 KLRA1P-201ENST00000503499 986 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 AC108471.1-201ENST00000513977 287 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 RNU6-1220P-201ENST00000517126 108 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.92□□□□□ -1.94
COL2A1P02458 IGKV2-36-201ENST00000519999 223 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 AP003467.2-201ENST00000520175 319 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 HIGD1AP6-201ENST00000521833 279 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 SUB1P2-201ENST00000556401 297 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.92□□□□□ -1.94
COL2A1P02458 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.92□□□□□ -1.94
COL2A1P02458 MAGOH2P-202ENST00000584384 429 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 SNORD39.3-201ENST00000584451 71 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 TPMTP1-201ENST00000592307 737 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 BCRP9-201ENST00000605312 388 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 AL162730.1-201ENST00000605734 292 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.92□□□□□ -1.94
COL2A1P02458 RMST_7.1-201ENST00000621935 268 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL2A1P02458 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
COL2A1P02458 AC006378.2-201ENST00000623178 2476 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 Z73965.1-201ENST00000623412 2297 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 AP002907.1-201ENST00000606361 1430 ntBASIC2.92□□□□□ -1.94
COL2A1P02458 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 RNU6-456P-201ENST00000384493 107 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 Y_RNA.548-201ENST00000384656 105 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AL591416.1-201ENST00000404015 867 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 MIR1302-11-201ENST00000408051 138 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 MIR1302-9-201ENST00000408365 138 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 SNORD88.1-201ENST00000408684 91 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 MIR1302-10-201ENST00000408734 138 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 RNU6-908P-201ENST00000410160 94 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms