Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 USP9YP6-201ENST00000413550 854 ntBASIC2.81□□□□□ -1.96
SIX3O95343 NPM1P11-201ENST00000417106 855 ntBASIC2.81□□□□□ -1.96
SIX3O95343 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.81□□□□□ -1.96
SIX3O95343 AC007560.1-201ENST00000426912 237 ntBASIC2.81□□□□□ -1.96
SIX3O95343 AC098831.1-201ENST00000440661 216 ntBASIC2.81□□□□□ -1.96
SIX3O95343 TAF9P1-201ENST00000445421 515 ntBASIC2.81□□□□□ -1.96
SIX3O95343 AL033528.1-201ENST00000453780 140 ntBASIC2.81□□□□□ -1.96
SIX3O95343 TAF9P2-201ENST00000454958 515 ntBASIC2.81□□□□□ -1.96
SIX3O95343 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.81□□□□□ -1.96
SIX3O95343 AC007182.2-201ENST00000489251 402 ntBASIC2.81□□□□□ -1.96
SIX3O95343 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.81□□□□□ -1.96
SIX3O95343 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.81□□□□□ -1.96
SIX3O95343 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.81□□□□□ -1.96
SIX3O95343 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.81□□□□□ -1.96
SIX3O95343 AC007834.2-201ENST00000536310 343 ntBASIC2.81□□□□□ -1.96
SIX3O95343 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.81□□□□□ -1.96
SIX3O95343 OSBPL9P5-201ENST00000542581 171 ntBASIC2.81□□□□□ -1.96
SIX3O95343 GLYCAM1-201ENST00000546596 285 ntBASIC2.81□□□□□ -1.96
SIX3O95343 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.81□□□□□ -1.96
SIX3O95343 AL158211.1-201ENST00000566763 763 ntBASIC2.81□□□□□ -1.96
SIX3O95343 AC174048.1-201ENST00000603389 144 ntBASIC2.81□□□□□ -1.96
SIX3O95343 AC019159.1-201ENST00000605094 187 ntBASIC2.81□□□□□ -1.96
SIX3O95343 AP002360.4-201ENST00000606980 481 ntBASIC2.81□□□□□ -1.96
SIX3O95343 AC090115.4-201ENST00000609970 188 ntBASIC2.81□□□□□ -1.96
SIX3O95343 AC131902.3-201ENST00000611767 581 ntBASIC2.81□□□□□ -1.96
SIX3O95343 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SIX3O95343 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.81□□□□□ -1.96
SIX3O95343 ASNSP3-201ENST00000451989 1306 ntBASIC2.81□□□□□ -1.96
SIX3O95343 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.81□□□□□ -1.96
SIX3O95343 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SIX3O95343 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SIX3O95343 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SIX3O95343 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SIX3O95343 MIR512-1-201ENST00000384913 84 ntBASIC2.8□□□□□ -1.96
SIX3O95343 MIR627-201ENST00000384979 97 ntBASIC2.8□□□□□ -1.96
SIX3O95343 AL356057.2-201ENST00000403318 432 ntBASIC2.8□□□□□ -1.96
SIX3O95343 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
SIX3O95343 RPS3AP3-201ENST00000411933 242 ntBASIC2.8□□□□□ -1.96
SIX3O95343 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.8□□□□□ -1.96
SIX3O95343 AC080125.1-201ENST00000414888 684 ntBASIC2.8□□□□□ -1.96
SIX3O95343 RPS24P13-201ENST00000442520 397 ntBASIC2.8□□□□□ -1.96
SIX3O95343 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.8□□□□□ -1.96
SIX3O95343 OSTCP8-201ENST00000445117 448 ntBASIC2.8□□□□□ -1.96
SIX3O95343 MTATP6P7-201ENST00000453315 681 ntBASIC2.8□□□□□ -1.96
SIX3O95343 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.8□□□□□ -1.96
SIX3O95343 GZMAP1-201ENST00000503054 631 ntBASIC2.8□□□□□ -1.96
SIX3O95343 SNORA31.18-201ENST00000517043 134 ntBASIC2.8□□□□□ -1.96
SIX3O95343 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SIX3O95343 AP003122.4-201ENST00000530980 758 ntBASIC2.8□□□□□ -1.96
SIX3O95343 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.8□□□□□ -1.96
SIX3O95343 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.8□□□□□ -1.96
SIX3O95343 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.8□□□□□ -1.96
SIX3O95343 AL121821.2-201ENST00000556081 394 ntBASIC2.8□□□□□ -1.96
SIX3O95343 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.8□□□□□ -1.96
SIX3O95343 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.8□□□□□ -1.96
SIX3O95343 AC005771.1-201ENST00000585581 349 ntBASIC2.8□□□□□ -1.96
SIX3O95343 AC073544.2-201ENST00000601155 540 ntBASIC2.8□□□□□ -1.96
SIX3O95343 AC019226.2-201ENST00000625973 424 ntBASIC2.8□□□□□ -1.96
SIX3O95343 PISRT1-201ENST00000626175 531 ntBASIC2.8□□□□□ -1.96
SIX3O95343 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SIX3O95343 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SIX3O95343 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SIX3O95343 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SIX3O95343 AC004520.1-201ENST00000608362 1413 ntBASIC2.79□□□□□ -1.96
SIX3O95343 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SIX3O95343 MIR147B-201ENST00000390185 80 ntBASIC2.79□□□□□ -1.96
SIX3O95343 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SIX3O95343 RPS3AP36-201ENST00000398190 775 ntBASIC2.79□□□□□ -1.96
SIX3O95343 RNU2-39P-201ENST00000410604 198 ntBASIC2.79□□□□□ -1.96
SIX3O95343 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX3O95343 AC092809.3-201ENST00000415453 231 ntBASIC2.79□□□□□ -1.96
SIX3O95343 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.79□□□□□ -1.96
SIX3O95343 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.79□□□□□ -1.96
SIX3O95343 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.79□□□□□ -1.96
SIX3O95343 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.79□□□□□ -1.96
SIX3O95343 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX3O95343 AL603825.1-201ENST00000438481 80 ntBASIC2.79□□□□□ -1.96
SIX3O95343 COX6CP2-201ENST00000444980 225 ntBASIC2.79□□□□□ -1.96
SIX3O95343 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.79□□□□□ -1.96
SIX3O95343 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.79□□□□□ -1.96
SIX3O95343 AC117522.1-201ENST00000509821 380 ntBASIC2.79□□□□□ -1.96
SIX3O95343 AC022447.1-201ENST00000515358 464 ntBASIC2.79□□□□□ -1.96
SIX3O95343 Vault.3-201ENST00000516676 95 ntBASIC2.79□□□□□ -1.96
SIX3O95343 RNU6-914P-201ENST00000516749 109 ntBASIC2.79□□□□□ -1.96
SIX3O95343 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.79□□□□□ -1.96
SIX3O95343 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.79□□□□□ -1.96
SIX3O95343 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.79□□□□□ -1.96
SIX3O95343 ADI1P3-201ENST00000549509 470 ntBASIC2.79□□□□□ -1.96
SIX3O95343 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.79□□□□□ -1.96
SIX3O95343 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.79□□□□□ -1.96
SIX3O95343 OR1M4P-201ENST00000589199 287 ntBASIC2.79□□□□□ -1.96
SIX3O95343 CLIC4P2-201ENST00000601934 717 ntBASIC2.79□□□□□ -1.96
SIX3O95343 AL590229.1-201ENST00000603497 542 ntBASIC2.79□□□□□ -1.96
SIX3O95343 SEPT7P9-203ENST00000604116 343 ntBASIC2.79□□□□□ -1.96
SIX3O95343 AC121247.2-201ENST00000604776 136 ntBASIC2.79□□□□□ -1.96
SIX3O95343 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.79□□□□□ -1.96
SIX3O95343 AC073114.1-201ENST00000612027 490 ntBASIC2.79□□□□□ -1.96
SIX3O95343 AC107871.2-201ENST00000612894 502 ntBASIC2.79□□□□□ -1.96
SIX3O95343 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.79□□□□□ -1.96
SIX3O95343 AL359547.2-201ENST00000615810 418 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms