Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC108479.2-201ENST00000617314 601 ntBASIC2.56□□□□□ -2
SLC28A1O00337 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.56□□□□□ -2
SLC28A1O00337 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SLC28A1O00337 AC004520.1-201ENST00000608362 1413 ntBASIC2.56□□□□□ -2
SLC28A1O00337 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.55□□□□□ -2
SLC28A1O00337 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SLC28A1O00337 Y_RNA.534-201ENST00000384599 112 ntBASIC2.55□□□□□ -2
SLC28A1O00337 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
SLC28A1O00337 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.55□□□□□ -2
SLC28A1O00337 RNU2-25P-201ENST00000411041 191 ntBASIC2.55□□□□□ -2
SLC28A1O00337 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.55□□□□□ -2
SLC28A1O00337 AL591704.1-201ENST00000432574 275 ntBASIC2.55□□□□□ -2
SLC28A1O00337 RPS24P1-201ENST00000438550 371 ntBASIC2.55□□□□□ -2
SLC28A1O00337 BRK1P2-201ENST00000442875 223 ntBASIC2.55□□□□□ -2
SLC28A1O00337 FABP5P13-201ENST00000452144 328 ntBASIC2.55□□□□□ -2
SLC28A1O00337 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.55□□□□□ -2
SLC28A1O00337 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.55□□□□□ -2
SLC28A1O00337 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.55□□□□□ -2
SLC28A1O00337 AC098862.1-201ENST00000504991 413 ntBASIC2.55□□□□□ -2
SLC28A1O00337 TBCAP3-201ENST00000512475 312 ntBASIC2.55□□□□□ -2
SLC28A1O00337 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.55□□□□□ -2
SLC28A1O00337 RNU6-914P-201ENST00000516749 109 ntBASIC2.55□□□□□ -2
SLC28A1O00337 RNU6-1315P-201ENST00000517187 99 ntBASIC2.55□□□□□ -2
SLC28A1O00337 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.55□□□□□ -2
SLC28A1O00337 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.55□□□□□ -2
SLC28A1O00337 AL391813.1-201ENST00000603098 260 ntBASIC2.55□□□□□ -2
SLC28A1O00337 AC025048.6-202ENST00000627667 438 ntBASIC2.55□□□□□ -2
SLC28A1O00337 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SLC28A1O00337 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLC28A1O00337 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SLC28A1O00337 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
SLC28A1O00337 RNU1-112P-201ENST00000364401 164 ntBASIC2.54□□□□□ -2
SLC28A1O00337 RNU6-1083P-201ENST00000384022 107 ntBASIC2.54□□□□□ -2
SLC28A1O00337 U3.26-201ENST00000391236 204 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.54□□□□□ -2
SLC28A1O00337 AC080125.1-201ENST00000414888 684 ntBASIC2.54□□□□□ -2
SLC28A1O00337 BX682237.1-201ENST00000415016 335 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.54□□□□□ -2
SLC28A1O00337 MTND2P18-201ENST00000419962 1030 ntBASIC2.54□□□□□ -2
SLC28A1O00337 CYCSP46-201ENST00000423569 204 ntBASIC2.54□□□□□ -2
SLC28A1O00337 RPL23AP30-201ENST00000432419 501 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AL161651.1-201ENST00000440882 223 ntBASIC2.54□□□□□ -2
SLC28A1O00337 MTND6P13-201ENST00000443510 523 ntBASIC2.54□□□□□ -2
SLC28A1O00337 NANOGNBP1-201ENST00000448444 480 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.54□□□□□ -2
SLC28A1O00337 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.54□□□□□ -2
SLC28A1O00337 MTCO2P6-201ENST00000463134 685 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.54□□□□□ -2
SLC28A1O00337 S100A11P2-201ENST00000467589 312 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.54□□□□□ -2
SLC28A1O00337 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.54□□□□□ -2
SLC28A1O00337 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.54□□□□□ -2
SLC28A1O00337 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.54□□□□□ -2
SLC28A1O00337 SNORA31.18-201ENST00000517043 134 ntBASIC2.54□□□□□ -2
SLC28A1O00337 RNU6-1183P-201ENST00000517054 60 ntBASIC2.54□□□□□ -2
SLC28A1O00337 SNORA70.24-201ENST00000517233 118 ntBASIC2.54□□□□□ -2
SLC28A1O00337 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SLC28A1O00337 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.54□□□□□ -2
SLC28A1O00337 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.54□□□□□ -2
SLC28A1O00337 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.54□□□□□ -2
SLC28A1O00337 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
SLC28A1O00337 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.54□□□□□ -2
SLC28A1O00337 AL121821.2-201ENST00000556081 394 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.54□□□□□ -2
SLC28A1O00337 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.54□□□□□ -2
SLC28A1O00337 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.54□□□□□ -2
SLC28A1O00337 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.54□□□□□ -2
SLC28A1O00337 CYCSP39-201ENST00000565821 309 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.54□□□□□ -2
SLC28A1O00337 MIR4782-201ENST00000577987 79 ntBASIC2.54□□□□□ -2
SLC28A1O00337 MIR3167-201ENST00000579623 85 ntBASIC2.54□□□□□ -2
SLC28A1O00337 MIR5092-201ENST00000583139 88 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.54□□□□□ -2
SLC28A1O00337 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AC005261.5-201ENST00000596280 355 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AC007938.3-201ENST00000604965 623 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AC135507.1-201ENST00000607214 561 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AC091304.9-201ENST00000612091 226 ntBASIC2.54□□□□□ -2
SLC28A1O00337 AL589743.7-201ENST00000612637 233 ntBASIC2.54□□□□□ -2
SLC28A1O00337 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.54□□□□□ -2
SLC28A1O00337 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLC28A1O00337 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SLC28A1O00337 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SLC28A1O00337 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
SLC28A1O00337 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.53□□□□□ -2
SLC28A1O00337 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC28A1O00337 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.53□□□□□ -2
SLC28A1O00337 RNU4-21P-201ENST00000362802 126 ntBASIC2.53□□□□□ -2
SLC28A1O00337 RNY1P12-201ENST00000364251 105 ntBASIC2.53□□□□□ -2
SLC28A1O00337 RNU1-109P-201ENST00000383960 147 ntBASIC2.53□□□□□ -2
SLC28A1O00337 RNU6-39P-201ENST00000384344 107 ntBASIC2.53□□□□□ -2
SLC28A1O00337 SNORA44-201ENST00000384584 132 ntBASIC2.53□□□□□ -2
SLC28A1O00337 SNORA26.8-201ENST00000391306 124 ntBASIC2.53□□□□□ -2
SLC28A1O00337 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.53□□□□□ -2
SLC28A1O00337 AL356057.2-201ENST00000403318 432 ntBASIC2.53□□□□□ -2
SLC28A1O00337 RPS3AP3-201ENST00000411933 242 ntBASIC2.53□□□□□ -2
SLC28A1O00337 USP9YP6-201ENST00000413550 854 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AL109913.1-201ENST00000421173 514 ntBASIC2.53□□□□□ -2
SLC28A1O00337 PGBD4P3-201ENST00000440731 581 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AC011816.1-201ENST00000441346 546 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms