Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC53A6NM62 RPL36AP53-201ENST00000432891 316 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC093392.2-201ENST00000450682 337 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC53A6NM62 AL031183.1-201ENST00000457667 207 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 SRRM1P2-201ENST00000464531 1192 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 RPL21P8-201ENST00000465083 535 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC139453.3-201ENST00000493276 369 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC109927.2-201ENST00000506416 303 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC104806.1-201ENST00000508720 308 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC098591.2-201ENST00000510152 315 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC53A6NM62 RNU6-143P-201ENST00000516942 93 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.19□□□□□ -1.9
LRRC53A6NM62 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC53A6NM62 AP003034.1-201ENST00000534621 422 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC005951.1-201ENST00000576706 485 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC008752.3-201ENST00000588113 712 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 DEFB131E-202ENST00000602581 683 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC012119.1-201ENST00000603184 222 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC080078.2-201ENST00000603766 501 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRC53A6NM62 AL020991.1-201ENST00000612314 373 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC073308.1-201ENST00000623696 305 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC005609.4-201ENST00000625071 447 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRC53A6NM62 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC53A6NM62 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 RNA5SP267-201ENST00000364893 126 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 Y_RNA.372-201ENST00000365599 102 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 RNU6-1158P-201ENST00000391167 107 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 RPL21P40-201ENST00000428586 483 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 RPL37P4-201ENST00000448908 268 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC027673.1-201ENST00000456245 405 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC091179.1-201ENST00000461606 579 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC019235.1-201ENST00000503847 207 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC092436.1-201ENST00000506450 503 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 ARL4AP2-201ENST00000507378 601 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC009646.1-201ENST00000510455 318 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC53A6NM62 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 OR5BN1P-201ENST00000532955 829 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC245389.1-201ENST00000605141 529 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AL670379.4-201ENST00000605279 254 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC126118.1-201ENST00000607744 628 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AP001486.3-201ENST00000615334 372 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 CR381653.2-201ENST00000624041 768 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC103988.1-201ENST00000566382 2177 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 AC022336.2-201ENST00000568966 2538 ntBASIC3.18□□□□□ -1.9
LRRC53A6NM62 CKAP2P1-201ENST00000555477 2049 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AC093010.3-201ENST00000570269 15214 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 GABRG2-229ENST00000641017 3628 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC53A6NM62 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC53A6NM62 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC53A6NM62 RNU6-884P-201ENST00000363889 107 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 Y_RNA.554-201ENST00000384672 102 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 U3.19-201ENST00000390893 196 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 Y_RNA.599-201ENST00000410489 109 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 RNU2-68P-201ENST00000410878 191 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 RNA5SP120-201ENST00000410900 112 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 AC080125.1-201ENST00000414888 684 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 MTCO3P30-201ENST00000426425 670 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AL591704.1-201ENST00000432574 275 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AL606489.2-201ENST00000433886 234 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AL356010.1-201ENST00000456364 102 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 RN7SL601P-201ENST00000471221 293 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 RN7SL504P-201ENST00000494496 287 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AC117522.3-201ENST00000507974 584 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 RNA5SP503-201ENST00000517047 117 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 RNU6-685P-201ENST00000517088 95 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AP003033.1-201ENST00000527244 415 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms