Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC008571.1-201ENST00000467232 300 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC116337.2-201ENST00000477662 156 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-927P-201ENST00000516199 100 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 RN7SKP258-201ENST00000517151 304 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC026241.1-201ENST00000517873 2142 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC060788.1-201ENST00000521318 469 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 ATP5F1P5-201ENST00000526403 760 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AP003181.2-201ENST00000528941 181 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC093012.1-202ENST00000549403 582 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AL391261.3-201ENST00000557194 520 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC008739.2-201ENST00000597006 317 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 NIFKP6-201ENST00000598115 845 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC012065.4-201ENST00000602445 679 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC103710.2-201ENST00000609912 942 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC138749.5-201ENST00000611461 208 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC004852.3-201ENST00000614131 326 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC116165.2-201ENST00000616705 206 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 AL603755.1-201ENST00000619504 163 ntBASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.4□□□□□ -2.03
SMIM28A0A1B0GU29 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-511P-201ENST00000363496 107 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-140P-201ENST00000384566 108 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 SNORA26.7-201ENST00000391288 122 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 FO393413.1-201ENST00000402892 195 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 NDUFS5P1-201ENST00000405668 289 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 Y_RNA.608-201ENST00000410647 95 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 BTF3L4P3-201ENST00000418879 476 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 Z99497.1-201ENST00000421282 135 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 RPL7P37-201ENST00000425095 738 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AL356583.2-201ENST00000426536 280 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 RPS6P15-201ENST00000431996 751 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AL121890.1-201ENST00000435457 205 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 RPL22P17-201ENST00000438729 315 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 RPL21P2-201ENST00000440049 481 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AC112204.1-201ENST00000502591 103 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 RPF2P2-201ENST00000504693 896 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AC098862.1-201ENST00000504991 413 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 SNORA31.3-201ENST00000516029 96 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 HSPE1P20-201ENST00000538133 289 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 KC877982.1-201ENST00000602313 470 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AL627309.6-201ENST00000606857 840 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AC090970.3-201ENST00000612566 866 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AL160394.1-201ENST00000624765 724 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 AC092104.1-201ENST00000497346 1441 ntBASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMIM28A0A1B0GU29 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 RNU4-21P-201ENST00000362802 126 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 RNU1-105P-201ENST00000363470 161 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 RNU5F-7P-201ENST00000363696 115 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-1284P-201ENST00000363701 100 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 RNU5E-5P-201ENST00000365379 116 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-14P-201ENST00000384630 106 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 ELOCP17-201ENST00000414751 326 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 MTND2P18-201ENST00000419962 1030 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 ZNF863P-201ENST00000426746 417 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 WASF1P1-201ENST00000447560 1131 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 MTND3P7-201ENST00000474435 343 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 RPS29P20-201ENST00000489592 171 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC138853.1-201ENST00000503549 823 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 MTCO1P47-201ENST00000523889 1271 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AP006587.4-201ENST00000526053 529 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 HMGN2P15-201ENST00000585707 270 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 HMGN1P30-201ENST00000589286 268 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC098826.3-201ENST00000603823 466 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms