Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU6-525P-201ENST00000363685 104 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-384P-201ENST00000364900 104 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 RNA5SP151-201ENST00000365632 117 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 Y_RNA.482-201ENST00000384377 111 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-658P-201ENST00000384606 106 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-306P-201ENST00000384617 107 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-95P-201ENST00000384697 107 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AL360182.1-201ENST00000397433 468 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 RAB9AP3-201ENST00000412737 573 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AL159169.1-201ENST00000421119 127 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 SKA2P1-201ENST00000425592 390 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AL078601.1-201ENST00000444542 271 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 RAB9AP1-201ENST00000449393 573 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AL031274.1-201ENST00000450334 232 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 RPL23AP65-201ENST00000475608 468 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC027575.1-201ENST00000481064 460 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC011005.2-201ENST00000487324 359 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 RPL21P13-201ENST00000488305 481 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC018437.1-201ENST00000492214 406 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC108022.1-201ENST00000493466 478 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC120057.2-201ENST00000571520 271 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC080078.3-201ENST00000605407 463 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC123912.5-201ENST00000605470 343 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 FTX_3.1-201ENST00000610451 147 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 PISRT1.1-201ENST00000616930 107 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 CUL1P1-201ENST00000509510 2425 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AL359693.1-201ENST00000614959 2407 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC005183.1-201ENST00000603687 1979 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC163A0A0D9SF12 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC163A0A0D9SF12 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 Y_RNA.473-201ENST00000384333 102 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 SNORD116-29-201ENST00000384516 83 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 MIR1302-11-201ENST00000408051 138 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 MIR1302-9-201ENST00000408365 138 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 MIR1302-10-201ENST00000408734 138 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 SNORA57.3-201ENST00000411095 141 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 RBMY1KP-201ENST00000423480 476 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AL627311.1-201ENST00000431514 115 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 MYL8P-204ENST00000431574 518 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 RPS29P19-201ENST00000479709 171 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-1170P-201ENST00000515974 106 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 RNU1-103P-201ENST00000516502 125 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 CYCSP30-201ENST00000546447 172 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 IMMP1LP2-201ENST00000552954 492 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 ANP32BP3-201ENST00000559213 706 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AC022655.2-201ENST00000577280 318 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 MIR4782-201ENST00000577987 79 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 MIR1302-2-201ENST00000607096 138 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AC064836.2-201ENST00000609491 462 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AC019176.2-201ENST00000611579 315 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AC084757.4-201ENST00000616350 526 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AC090971.5-201ENST00000621102 293 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AC019278.1-201ENST00000623516 479 ntBASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC163A0A0D9SF12 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 RNU1-108P-201ENST00000362556 161 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-884P-201ENST00000363889 107 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 SNORD14B-201ENST00000364533 90 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-1329P-201ENST00000365664 107 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-166P-201ENST00000384371 107 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 MIR34A-201ENST00000385130 110 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 RNY4P36-201ENST00000391116 96 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 SNORA40C-201ENST00000391285 128 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms