Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC093752.1-206ENST00000511823 336 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 MRPS33P3-201ENST00000513456 322 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AC112198.4-201ENST00000515450 351 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 RNU6-295P-201ENST00000516901 104 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AC087894.1-201ENST00000538359 518 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AL132657.2-201ENST00000564417 358 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 MIR3126-201ENST00000577443 74 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AC090897.2-201ENST00000581715 130 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 MIR4298-201ENST00000584380 73 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 MIR4765-201ENST00000585007 77 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AC007038.2-201ENST00000608095 740 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AC109809.1-201ENST00000619665 545 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AC009268.2-201ENST00000621925 457 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AP003485.1-201ENST00000625093 753 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AL079343.1-201ENST00000572358 1771 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 ZNF702P-202ENST00000434269 1966 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AL356421.1-201ENST00000403255 413 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 TXNP7-201ENST00000406296 293 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AL590084.1-201ENST00000407885 387 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 MIR1289-2-201ENST00000408360 111 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 RNA5SP489-201ENST00000410986 109 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 UBE2FP1-201ENST00000416536 447 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 MTND4P3-201ENST00000417829 541 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 ELOCP14-201ENST00000428070 331 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 ELOCP7-201ENST00000439968 331 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 RPL23AP76-201ENST00000441860 458 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 snoU109.1-201ENST00000459339 135 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AL160314.1-201ENST00000490836 438 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 HMGB3P17-201ENST00000504195 649 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC116337.1-201ENST00000509680 687 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC008837.2-201ENST00000513076 418 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 RNA5SP137-201ENST00000516833 135 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 RNA5SP290-201ENST00000517133 127 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 HMGN1P28-201ENST00000521340 364 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 DEFB131D-201ENST00000526803 184 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC023538.1-201ENST00000534576 736 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC005832.3-201ENST00000537929 631 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC012435.1-202ENST00000568772 240 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 MIR4419B-201ENST00000577260 68 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 MIR4299-201ENST00000577899 72 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC011494.1-201ENST00000596454 237 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC024060.1-201ENST00000607052 494 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AL121652.1-201ENST00000608851 448 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC124016.2-201ENST00000610058 665 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 MIR6845-201ENST00000613182 61 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC084768.2-201ENST00000622736 221 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 AC231657.1-201ENST00000624313 397 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 MIR3199-2-201ENST00000636243 86 ntBASIC1.41□□□□□ -2.18
TRAV41A0A0B4J266 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-777P-201ENST00000364265 104 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-744P-201ENST00000365557 107 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-1316P-201ENST00000384242 108 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 MIR9-3-201ENST00000385084 90 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 BTF3L4P3-201ENST00000418879 476 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 HMGN2P19-201ENST00000425149 265 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 FABP5P14-201ENST00000437273 393 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AL451074.3-201ENST00000437709 472 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 RPL7P54-201ENST00000438336 674 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 TPT1P14-201ENST00000448018 505 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 RPS15AP36-201ENST00000492022 382 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 MTND4P2-201ENST00000507767 1203 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 RNA5SP112-201ENST00000515937 99 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AP003168.1-201ENST00000530091 307 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AL049838.1-201ENST00000563647 981 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms