Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.2□□□□□ -1.9
GTF2A1LQ9UNN4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 RNU6-1103P-201ENST00000384150 107 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 RNU6-72P-201ENST00000384285 79 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 FTH1P15-201ENST00000406984 280 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AL591419.1-201ENST00000427423 339 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 C4BPAP2-201ENST00000428434 478 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 MICF-203ENST00000432679 129 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 HIGD1AP2-201ENST00000446367 280 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 MRPL42P6-201ENST00000486397 371 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 HMGB1P29-201ENST00000505659 499 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC104136.1-201ENST00000512969 394 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 RNA5SP112-201ENST00000515937 99 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 MIR892C-201ENST00000516410 77 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 RPPH1-2P-201ENST00000516688 293 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 SCARNA3-201ENST00000517097 143 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 MIR2116-201ENST00000517221 80 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC024909.2-201ENST00000553035 286 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC106782.4-201ENST00000568264 210 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC008121.1-201ENST00000603244 268 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC091805.2-201ENST00000603848 235 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC006077.1-201ENST00000604746 343 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC007684.1-201ENST00000609671 477 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 RMST_8.1-201ENST00000610287 165 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 SCARNA4-202ENST00000625402 129 ntBASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GTF2A1LQ9UNN4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC138393.1-203ENST00000327086 343 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 RNU6-486P-201ENST00000363116 107 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 Y_RNA.159-201ENST00000363674 87 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 RNU6-213P-201ENST00000384051 104 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 MIR218-1-201ENST00000384999 110 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AL353621.1-201ENST00000418219 243 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AL139247.1-201ENST00000422768 325 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 MTCO3P30-201ENST00000426425 670 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 RPL7P2-201ENST00000427639 268 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AL451074.3-201ENST00000437709 472 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 GMFBP1-201ENST00000467831 427 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC006445.1-201ENST00000491925 405 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC108078.1-201ENST00000508073 725 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC105417.1-201ENST00000514691 285 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 RNU6-1178P-201ENST00000516674 107 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 FAM92A1P1-201ENST00000528023 890 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC083809.1-201ENST00000615051 472 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 AC005609.4-201ENST00000625071 447 ntBASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
GTF2A1LQ9UNN4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 AC126755.2-208ENST00000327792 462 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 AC138969.1-213ENST00000331436 462 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 SNORA56-201ENST00000383966 129 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 RNU6-45P-201ENST00000384471 107 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 RPL32P23-201ENST00000397237 405 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 CIR1P3-201ENST00000405137 479 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 PGBD4P6-201ENST00000421501 610 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 AL356010.1-201ENST00000456364 102 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 AC006026.2-201ENST00000457376 180 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 RNU7-63P-201ENST00000459054 62 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 RNU2-27P-201ENST00000516185 142 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 SCARNA14-201ENST00000516903 136 ntBASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.17□□□□□ -1.9
GTF2A1LQ9UNN4 AC009163.5-201ENST00000575421 637 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms