Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AP000889.1-201ENST00000530968 660 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AL137161.1-201ENST00000532231 390 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC092325.1-201ENST00000566449 554 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 MIR4424-201ENST00000585257 86 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 HMGN2P15-201ENST00000585707 270 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 MTND4LP5-201ENST00000605152 292 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 SNORA62.6-201ENST00000606322 83 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 MIR486-1-201ENST00000612171 68 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC007014.2-201ENST00000615581 479 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 AC010338.1-201ENST00000621823 717 ntBASIC3.44□□□□□ -1.86
LRFN1Q9P244 FER-210ENST00000628534 558 ntTSL 5 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
LRFN1Q9P244 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRFN1Q9P244 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 MIR412-201ENST00000362142 91 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 RNU6-1127P-201ENST00000384580 107 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 AL136116.1-201ENST00000403591 381 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 AL354719.1-201ENST00000406535 843 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 SNORA11.2-201ENST00000408318 127 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 RNU6-193P-201ENST00000410977 107 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 RPS29P4-201ENST00000414733 161 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 SYF2P2-201ENST00000417620 583 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 HSPE1P1-201ENST00000421494 318 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 MTND4LP11-201ENST00000422184 280 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 BPY2DP-201ENST00000422208 265 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 MTCO1P20-201ENST00000425366 358 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 AL669831.1-202ENST00000428504 417 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 RPL21P40-201ENST00000428586 483 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 GTF2IP13-201ENST00000438487 386 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 RPS3AP46-201ENST00000448352 682 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 NDUFB1P2-201ENST00000449477 176 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 RPL23AP11-201ENST00000475260 469 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 AC008716.1-201ENST00000511084 513 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 RNU6-572P-201ENST00000516724 80 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 SNORA31.19-201ENST00000517079 126 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 RNU6-1231P-201ENST00000517185 103 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 NACAP3-201ENST00000552100 481 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 AL138976.2-201ENST00000563989 694 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 MTCO3P24-201ENST00000572729 782 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 AC015917.1-201ENST00000579654 510 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 MIR5692A1-201ENST00000580523 69 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 AL137849.1-201ENST00000604767 169 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 YWHAEP7-203ENST00000622054 312 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 MTCO1P12-201ENST00000414273 1543 ntBASIC3.43□□□□□ -1.86
LRFN1Q9P244 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRFN1Q9P244 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.43□□□□□ -1.86
LRFN1Q9P244 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRFN1Q9P244 AC091564.4-201ENST00000533934 2194 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRFN1Q9P244 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRFN1Q9P244 RNU6-799P-201ENST00000363567 107 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 RNU6-1090P-201ENST00000364065 94 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 RNA5SP51-201ENST00000364750 119 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 RNU6-715P-201ENST00000365204 103 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 Y_RNA.453-201ENST00000384223 109 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 RNU6-166P-201ENST00000384371 107 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 RNA5SP424-201ENST00000390988 115 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 AC098831.1-201ENST00000440661 216 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 MTND4P18-201ENST00000447010 465 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 AC084198.1-201ENST00000477747 402 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 AC106707.2-201ENST00000484182 374 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 AC090877.1-201ENST00000561418 344 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 NUTF2P8-201ENST00000604593 363 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 RNU1-30P-201ENST00000606575 163 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 U3.45-201ENST00000607547 219 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 MIR3688-2-201ENST00000636963 87 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRFN1Q9P244 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 AC110491.1-201ENST00000562191 2010 ntBASIC3.42□□□□□ -1.86
LRFN1Q9P244 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.42□□□□□ -1.86
LRFN1Q9P244 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRFN1Q9P244 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms