Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU6-1167P-201ENST00000363227 94 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 RNU6-108P-201ENST00000365558 107 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 RNU6-217P-201ENST00000384164 104 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.4□□□□□ -1.87
USP44Q9H0E7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.4□□□□□ -1.87
USP44Q9H0E7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.4□□□□□ -1.87
USP44Q9H0E7 AC104651.1-201ENST00000427559 735 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.4□□□□□ -1.87
USP44Q9H0E7 MTND2P33-201ENST00000506452 1031 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 AC010493.1-201ENST00000513479 292 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 RNA5SP380-201ENST00000517190 98 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
USP44Q9H0E7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.4□□□□□ -1.87
USP44Q9H0E7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.4□□□□□ -1.87
USP44Q9H0E7 AL391840.1-201ENST00000571144 367 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 AC006504.3-201ENST00000586818 523 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 AL136363.2-201ENST00000604173 851 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 HSPE1P7-201ENST00000604681 321 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 NDUFA8P1-201ENST00000605525 367 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 AC012557.2-201ENST00000605919 418 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 AC091834.1-201ENST00000614543 472 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 AC099842.1-201ENST00000619919 596 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 AC138649.3-201ENST00000622154 254 ntBASIC3.4□□□□□ -1.87
USP44Q9H0E7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.4□□□□□ -1.87
USP44Q9H0E7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.4□□□□□ -1.87
USP44Q9H0E7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
USP44Q9H0E7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP44Q9H0E7 RNU6-169P-201ENST00000365336 107 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP44Q9H0E7 RNU6-701P-201ENST00000384059 107 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 Y_RNA.517-201ENST00000384551 106 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 Y_RNA.582-201ENST00000391023 95 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 SNORA48.8-201ENST00000391324 134 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 BX295541.1-201ENST00000417774 250 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AL139281.1-201ENST00000422120 335 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC012498.1-201ENST00000424037 437 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC007283.2-201ENST00000424739 197 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 ZNF863P-201ENST00000426746 417 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC010975.2-201ENST00000427781 588 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC133104.1-201ENST00000429100 218 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC244505.4-201ENST00000434905 287 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 SSXP5-201ENST00000443473 287 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 SNORD109B-201ENST00000458961 67 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 SNORD109A-201ENST00000459128 67 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC103975.1-201ENST00000482506 483 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 RN7SL283P-201ENST00000489055 303 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC007182.2-201ENST00000489251 402 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 RPL39P36-201ENST00000490784 156 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC117522.1-201ENST00000509821 380 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 RNU6-677P-201ENST00000516914 101 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 RNU6-410P-201ENST00000517006 107 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 RNU6-430P-201ENST00000517078 107 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 RNU6-711P-201ENST00000517255 106 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AP003392.2-201ENST00000527269 208 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC009063.1-201ENST00000563342 702 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 GLUD1P4-201ENST00000590914 418 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC012119.1-201ENST00000603184 222 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC073648.5-201ENST00000603502 305 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP44Q9H0E7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 AP003122.6-201ENST00000623831 495 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 AC084035.1-201ENST00000634543 607 ntBASIC3.39□□□□□ -1.87
USP44Q9H0E7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP44Q9H0E7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP44Q9H0E7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
USP44Q9H0E7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 MIR1289-1-201ENST00000408836 144 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 RNU2-39P-201ENST00000410604 198 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 RNU6-387P-201ENST00000411331 105 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 NUP35P1-201ENST00000422734 947 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 ELOCP14-201ENST00000428070 331 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 AC007919.1-201ENST00000429380 217 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 GPR143P-201ENST00000434155 205 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 ELOCP7-201ENST00000439968 331 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 AL109933.2-201ENST00000452651 260 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.38□□□□□ -1.87
USP44Q9H0E7 AP002884.2-201ENST00000471647 395 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 KC877373.1-201ENST00000479066 408 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 AC026801.1-201ENST00000497178 464 ntBASIC3.38□□□□□ -1.87
USP44Q9H0E7 AC010265.1-201ENST00000513509 211 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms