Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 RNU6-200P-201ENST00000364743 107 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-1297P-201ENST00000384415 104 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 SNORD116-29-201ENST00000384516 83 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-253P-201ENST00000384730 105 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-932P-201ENST00000391108 106 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-373P-201ENST00000411247 98 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AL445183.3-201ENST00000414168 502 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC008173.1-201ENST00000418901 264 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RPL31P12-201ENST00000422587 358 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 PIGPP3-201ENST00000425307 415 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RAC1P8-201ENST00000427086 527 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 TOMM20P4-201ENST00000427861 435 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 EIF1P2-201ENST00000428233 350 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 HMGN2P3-201ENST00000433603 273 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 HMGN2P5-201ENST00000436882 273 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AL022238.1-201ENST00000442557 355 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 CBWD4P-201ENST00000445695 655 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AL035666.1-201ENST00000446195 348 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 HIGD1AP2-201ENST00000446367 280 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC125238.1-201ENST00000448842 249 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RPL7P31-201ENST00000450192 724 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC133134.1-201ENST00000466800 359 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC103975.1-201ENST00000482506 483 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC108860.1-201ENST00000484521 383 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 HMGB3P15-201ENST00000507326 574 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC010587.2-201ENST00000511727 448 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC026412.2-201ENST00000512270 1075 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC108471.1-201ENST00000513977 287 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-408P-201ENST00000515910 100 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-991P-201ENST00000516168 107 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-1281P-201ENST00000516223 105 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNY3P15-201ENST00000516297 97 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 Y_RNA.718-201ENST00000517110 102 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC068657.1-201ENST00000520807 306 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 IGJP1-201ENST00000522682 475 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 COPS8P3-201ENST00000526024 482 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AP003122.4-201ENST00000530980 758 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AL163153.1-201ENST00000554223 283 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC025918.2-201ENST00000558683 763 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 MIR3133-201ENST00000583157 78 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 MIR3605-201ENST00000583214 100 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AL162413.1-201ENST00000603198 110 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AP005137.2-201ENST00000609238 400 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC103710.1-201ENST00000610003 901 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 RMST_3.1-201ENST00000611651 109 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AL133370.2-201ENST00000619934 439 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 U4.3-201ENST00000621047 82 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC134882.1-201ENST00000603738 1676 ntBASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-1Q9BYQ7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC012078.1-201ENST00000405035 1646 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC097714.1-201ENST00000511272 1647 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 AC092447.10-201ENST00000620607 1652 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 OR52B1P-201ENST00000316506 909 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 SNORD50.1-201ENST00000362987 71 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 Y_RNA.184-201ENST00000363884 108 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-81P-201ENST00000365608 104 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-886P-201ENST00000384319 105 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 Y_RNA.481-201ENST00000384373 102 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 SNORA51.12-201ENST00000384448 134 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-125P-201ENST00000384505 107 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 Y_RNA.515-201ENST00000384535 112 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNA5SP210-201ENST00000391034 120 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-796P-201ENST00000391086 107 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNY4P36-201ENST00000391116 96 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 RNU6-510P-201ENST00000391239 108 ntBASIC1.3□□□□□ -2.2
KRTAP4-1Q9BYQ7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms