Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU6-150P-201ENST00000516237 95 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 RNU6-1282P-201ENST00000516735 96 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 HMGB1P41-201ENST00000520234 440 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.11□□□□□ -2.07
CDX2Q99626 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.11□□□□□ -2.07
CDX2Q99626 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.11□□□□□ -2.07
CDX2Q99626 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.11□□□□□ -2.07
CDX2Q99626 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.11□□□□□ -2.07
CDX2Q99626 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.11□□□□□ -2.07
CDX2Q99626 AC060766.3-201ENST00000591442 263 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.11□□□□□ -2.07
CDX2Q99626 BBIP1P1-201ENST00000602999 279 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC009974.1-201ENST00000608881 455 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AL157392.4-201ENST00000609756 345 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC063944.3-201ENST00000609969 533 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 DUXAP10-204ENST00000612052 616 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC079395.3-201ENST00000615161 484 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC097520.1-201ENST00000624435 385 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AL160394.1-201ENST00000624765 724 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC116618.1-201ENST00000634617 774 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 OR5H6-203ENST00000642105 978 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDX2Q99626 AL049641.1-201ENST00000441055 1948 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDX2Q99626 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDX2Q99626 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDX2Q99626 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDX2Q99626 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDX2Q99626 AC005832.2-201ENST00000538921 1430 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDX2Q99626 RNU6-392P-201ENST00000364926 101 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 RNU6-1207P-201ENST00000384343 107 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 RNU6-1035P-201ENST00000384477 107 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 RNU6-584P-201ENST00000410350 95 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 SSR1P2-201ENST00000415208 787 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 TXNL1P1-201ENST00000429528 554 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 RPS25P9-201ENST00000435591 252 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 ATG12P2-201ENST00000456830 416 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 AL139824.2-201ENST00000458731 1095 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 RBM43P1-201ENST00000476891 1081 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 RPS27P27-201ENST00000498779 255 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 AC022447.3-201ENST00000506865 495 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 RNU6-1256P-201ENST00000516539 103 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 Y_RNA.717-201ENST00000517106 92 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 AC124947.2-202ENST00000552735 133 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 MTND3P12-201ENST00000559068 328 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.1□□□□□ -2.07
CDX2Q99626 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX2Q99626 AC006270.3-201ENST00000605967 1036 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 RNU4-5P-201ENST00000607255 135 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 AC005296.1-201ENST00000616145 209 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
CDX2Q99626 AC008443.7-201ENST00000622195 246 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.1□□□□□ -2.07
CDX2Q99626 MIR4275-201ENST00000636486 87 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 AC007785.2-201ENST00000598627 1916 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 KPNA2P1-201ENST00000458289 1591 ntBASIC2.1□□□□□ -2.07
CDX2Q99626 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CDX2Q99626 Z82209.1-201ENST00000422141 2135 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AP000776.1-201ENST00000530032 1663 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDX2Q99626 RNU6-198P-201ENST00000384258 104 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 RNU6-754P-201ENST00000391166 107 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 RNU6-193P-201ENST00000410977 107 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.09□□□□□ -2.07
CDX2Q99626 VPS26BP1-201ENST00000417155 755 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.09□□□□□ -2.07
CDX2Q99626 AL356867.1-201ENST00000429623 299 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 ATP5F1P1-201ENST00000433775 569 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 RSU1P2-202ENST00000437884 485 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.09□□□□□ -2.07
CDX2Q99626 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.09□□□□□ -2.07
CDX2Q99626 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.09□□□□□ -2.07
CDX2Q99626 Z73417.1-201ENST00000447373 778 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 MTCO1P27-201ENST00000448269 226 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.09□□□□□ -2.07
CDX2Q99626 MEMO1P3-201ENST00000459811 302 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AC005410.1-202ENST00000460347 485 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 MTND1P16-201ENST00000465177 898 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AC104563.1-201ENST00000476147 376 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AL049874.1-201ENST00000489560 388 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AC135721.1-201ENST00000497954 479 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 HMGB3P3-201ENST00000510526 400 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AC113155.1-201ENST00000511141 769 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AC116353.3-201ENST00000511215 249 ntBASIC2.09□□□□□ -2.07
CDX2Q99626 AC024589.1-201ENST00000512207 263 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms