Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AC008065.1-201ENST00000428525 348 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 RPL23AP69-201ENST00000431134 458 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 RPL7P42-201ENST00000481005 679 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 TRBVA-201ENST00000498804 316 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AC108078.2-201ENST00000510750 236 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 RN7SKP82-201ENST00000516786 223 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AC090136.1-201ENST00000520009 240 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 CR383656.7-201ENST00000548164 174 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AC007151.1-201ENST00000572774 483 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 MIR3160-1-201ENST00000577972 85 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 MIR4716-201ENST00000579628 84 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AC092747.3-201ENST00000603769 301 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AL031176.1-201ENST00000604554 466 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AF117829.1-206ENST00000621883 3802 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 SNORA50A-202ENST00000629536 136 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AC005183.1-201ENST00000603687 1979 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 FAM91A3P-201ENST00000456826 2544 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AP001486.2-201ENST00000561652 5113 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AC026951.1-201ENST00000559530 2459 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AC121333.1-201ENST00000567488 2709 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 RNA5SP119-201ENST00000362715 117 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 SNORA46-201ENST00000384762 135 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 SNORA3.3-201ENST00000408712 125 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 RN7SKP158-201ENST00000410453 326 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 RNU4-46P-201ENST00000410818 138 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 POLHP1-201ENST00000411806 470 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 AL139247.1-201ENST00000422768 325 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 PSMA2P3-201ENST00000429685 675 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 MTND3P2-201ENST00000438452 342 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 AC234775.1-201ENST00000454247 670 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 snoU109.4-201ENST00000458953 143 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 RPL23AP55-201ENST00000498163 452 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 AC093303.1-201ENST00000514549 295 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 RANP9-201ENST00000519957 271 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 MIR4512-201ENST00000583257 77 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 AC019193.3-201ENST00000609144 554 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 AL356274.2-201ENST00000624379 3752 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 ZNF33CP-201ENST00000432492 2030 ntBASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PDLIM2Q96JY6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.78□□□□□ -1.81
PDLIM2Q96JY6 TPTE2P4-201ENST00000258589 1605 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 RNU6-989P-201ENST00000362756 107 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 Y_RNA.144-201ENST00000363521 113 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 Y_RNA.187-201ENST00000363918 113 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 RNU6-82P-201ENST00000363970 107 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 Y_RNA.197-201ENST00000364004 102 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 RNA5SP515-201ENST00000364570 118 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 Y_RNA.395-201ENST00000383945 109 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 RNU6-639P-201ENST00000384074 107 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 Y_RNA.493-201ENST00000384422 102 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 RNU6-550P-201ENST00000391057 101 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AL445189.1-201ENST00000405722 338 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 MIR1193-201ENST00000408109 78 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 RPL21P24-201ENST00000413752 448 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AL139396.1-201ENST00000421137 167 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AC005517.2-201ENST00000424673 553 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AC244505.4-201ENST00000434905 287 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 SSXP5-201ENST00000443473 287 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 RNU7-152P-201ENST00000458982 64 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 RPL7P43-201ENST00000478876 753 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 HIGD1AP3-201ENST00000515857 278 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 RNU6-256P-201ENST00000516747 97 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 RNA5SP454-201ENST00000517231 127 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 MIR5187-201ENST00000583479 76 ntBASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM2Q96JY6 AC136443.5-201ENST00000603741 370 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms