Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 HMGB1P9-201ENST00000429856 646 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 GTF2IP20-201ENST00000431663 360 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC009961.2-201ENST00000435771 251 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 DNAJC19P4-201ENST00000440115 345 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 GSTA11P-201ENST00000452866 669 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 RPL23AP11-201ENST00000475260 469 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC007182.2-201ENST00000489251 402 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 SUMO2P6-201ENST00000505273 288 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC022616.3-201ENST00000523940 148 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 MIR3682-201ENST00000581338 84 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC023043.3-201ENST00000593113 385 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC010620.2-201ENST00000600135 313 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 SEPT7P9-203ENST00000604116 343 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC073657.2-201ENST00000605661 303 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 AF250324.2-201ENST00000608299 610 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC008250.2-201ENST00000615261 205 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 AC138932.5-201ENST00000617759 563 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 PISRT1-201ENST00000626175 531 ntBASIC2.7□□□□□ -1.98
RFT1Q96AA3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.7□□□□□ -1.98
RFT1Q96AA3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 RNU6-188P-201ENST00000364207 107 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 SNORD21-201ENST00000383953 95 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 MIR767-201ENST00000390228 109 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RFT1Q96AA3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 HMGN2P35-201ENST00000412164 270 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 MTND1P23-201ENST00000416931 372 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 ELOCP4-201ENST00000420090 333 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 RPL36AP6-201ENST00000435770 321 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 RPL21P41-201ENST00000459863 264 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 RPS29P20-201ENST00000489592 171 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 RPS27AP10-201ENST00000496103 208 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 AC026801.1-201ENST00000497178 464 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 RNU6-677P-201ENST00000516914 101 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AC008739.2-201ENST00000597006 317 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 AL355598.1-201ENST00000604169 202 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 AL355073.2-201ENST00000612106 557 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.69□□□□□ -1.98
RFT1Q96AA3 FARSBP1-201ENST00000435808 1778 ntBASIC2.69□□□□□ -1.98
RFT1Q96AA3 ELF2P3-201ENST00000445099 1506 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RFT1Q96AA3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC073343.1-201ENST00000328239 651 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 Y_RNA.6-201ENST00000362350 114 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 RNU1-73P-201ENST00000383971 164 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 RNU6-39P-201ENST00000384344 107 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 Y_RNA.534-201ENST00000384599 112 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 MIR200C-201ENST00000384980 68 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 PTMAP2-201ENST00000397627 327 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 FCF1P9-201ENST00000412546 282 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 AL451074.5-201ENST00000415894 435 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 BPY2DP-201ENST00000422208 265 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC009414.1-201ENST00000427200 443 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AL451062.2-201ENST00000427515 271 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.68□□□□□ -1.98
RFT1Q96AA3 MED13P1-201ENST00000428342 171 ntBASIC2.68□□□□□ -1.98
RFT1Q96AA3 RPL36AP53-201ENST00000432891 316 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms