Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.51□□□□□ -2.33
USP9XQ93008 MIR4658-201ENST00000584344 65 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 AC090425.2-201ENST00000608818 501 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.51□□□□□ -2.33
USP9XQ93008 RNY3P5-201ENST00000384127 102 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 AC083875.1-201ENST00000419509 405 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 MTND4LP13-201ENST00000425022 298 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.51□□□□□ -2.33
USP9XQ93008 AC010285.1-201ENST00000470580 392 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.51□□□□□ -2.33
USP9XQ93008 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.51□□□□□ -2.33
USP9XQ93008 MIR548AX-201ENST00000580117 73 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 AL355802.3-201ENST00000607571 545 ntBASIC0.51□□□□□ -2.33
USP9XQ93008 CCT4P2-201ENST00000233836 1548 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 RNU6-1181P-201ENST00000384191 106 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 AC068050.1-201ENST00000394891 380 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.5□□□□□ -2.33
USP9XQ93008 TOMM22P2-201ENST00000430735 237 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
USP9XQ93008 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.5□□□□□ -2.33
USP9XQ93008 AC098583.1-201ENST00000480875 255 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 AC118282.2-201ENST00000508739 374 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
USP9XQ93008 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.5□□□□□ -2.33
USP9XQ93008 AL355297.2-201ENST00000604792 129 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.5□□□□□ -2.33
USP9XQ93008 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.5□□□□□ -2.33
USP9XQ93008 SNORA36.1-201ENST00000363424 132 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.5□□□□□ -2.33
USP9XQ93008 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.5□□□□□ -2.33
USP9XQ93008 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.5□□□□□ -2.33
USP9XQ93008 AC025768.1-201ENST00000510057 267 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 NDUFS5P6-201ENST00000529136 295 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 AC090115.3-201ENST00000553218 849 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 AC073111.2-201ENST00000605657 1075 ntBASIC0.5□□□□□ -2.33
USP9XQ93008 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
USP9XQ93008 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
USP9XQ93008 RNU1-96P-201ENST00000364163 162 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 CISD1P1-201ENST00000393907 327 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 RNU4-78P-201ENST00000410940 126 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 AC073464.3-201ENST00000422564 712 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 MTATP6P4-201ENST00000427725 675 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 RSL24D1P8-201ENST00000434442 492 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 RPS26P56-201ENST00000444468 240 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.49□□□□□ -2.33
USP9XQ93008 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.49□□□□□ -2.33
USP9XQ93008 AC112487.2-201ENST00000637950 304 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
USP9XQ93008 RNU1-58P-201ENST00000362413 163 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 RNU6-989P-201ENST00000362756 107 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.49□□□□□ -2.33
USP9XQ93008 AC011406.1-201ENST00000512440 370 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
USP9XQ93008 AL109918.3-201ENST00000603072 338 ntBASIC0.49□□□□□ -2.33
USP9XQ93008 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
USP9XQ93008 RNY4P6-201ENST00000363667 96 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 MIR224-201ENST00000384889 81 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 RPL30P13-201ENST00000418873 348 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
USP9XQ93008 KLRA1P-201ENST00000503499 986 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 CBX3P3-201ENST00000508108 532 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.48□□□□□ -2.33
USP9XQ93008 HMGN2P30-201ENST00000423237 256 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.48□□□□□ -2.33
USP9XQ93008 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
USP9XQ93008 RNU6-491P-201ENST00000516099 110 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 CENPUP1-201ENST00000526649 1202 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.48□□□□□ -2.33
USP9XQ93008 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
USP9XQ93008 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
USP9XQ93008 AC006065.5-201ENST00000623427 349 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 AP003485.1-201ENST00000625093 753 ntBASIC0.48□□□□□ -2.33
USP9XQ93008 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.47□□□□□ -2.33
USP9XQ93008 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
USP9XQ93008 Y_RNA.228-201ENST00000364346 98 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 RNU6-1104P-201ENST00000384723 104 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
USP9XQ93008 AC106901.1-201ENST00000425086 698 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 CASP3P1-201ENST00000446037 609 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 snoU13.21-201ENST00000459368 105 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 AP003484.1-201ENST00000530974 250 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.47□□□□□ -2.33
USP9XQ93008 LINC00933-203ENST00000559812 219 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 AC004817.2-201ENST00000561794 651 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 AC008751.2-201ENST00000597885 980 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.47□□□□□ -2.33
USP9XQ93008 AC135999.1-201ENST00000478962 479 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.47□□□□□ -2.33
USP9XQ93008 VN1R84P-201ENST00000593697 235 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 DUSP12P1-201ENST00000612874 516 ntBASIC0.47□□□□□ -2.33
USP9XQ93008 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.47□□□□□ -2.33
USP9XQ93008 SNORA22-201ENST00000383907 134 ntBASIC0.46□□□□□ -2.34
USP9XQ93008 SNORA22C-201ENST00000384614 134 ntBASIC0.46□□□□□ -2.34
USP9XQ93008 Y_RNA.568-201ENST00000384742 113 ntBASIC0.46□□□□□ -2.34
USP9XQ93008 AC006461.1-201ENST00000412637 326 ntBASIC0.46□□□□□ -2.34
USP9XQ93008 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
USP9XQ93008 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.46□□□□□ -2.34
USP9XQ93008 MTND5P15-201ENST00000434246 349 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms