Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 PHBP14-201ENST00000512887 367 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 RNU6-579P-201ENST00000516879 102 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 SNORD60.2-201ENST00000516883 86 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AC068135.2-201ENST00000569293 1028 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AC015917.1-201ENST00000579654 510 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 KLKP1-201ENST00000595979 403 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AC006557.5-201ENST00000603126 811 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AL138889.2-201ENST00000603883 242 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 Z83843.1-201ENST00000604070 3685 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 HSPA8P4-201ENST00000511877 1920 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 MIR423-201ENST00000362201 94 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 RNU6-217P-201ENST00000384164 104 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 SNORA1.3-201ENST00000384676 136 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 HMGN2P8-201ENST00000391458 268 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AL122016.1-201ENST00000403365 367 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 U3.39-201ENST00000408569 239 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 RNU6-193P-201ENST00000410977 107 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 OR9R1P-201ENST00000412200 877 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 EEF1A1P40-201ENST00000412883 573 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC017079.2-201ENST00000416102 485 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC012498.1-201ENST00000424037 437 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 CALM1P1-201ENST00000442082 433 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 CECR9-201ENST00000453421 199 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 RN7SL93P-201ENST00000463035 293 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AP001486.1-201ENST00000463339 476 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 RN7SL594P-201ENST00000470590 287 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC012181.1-201ENST00000479895 423 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AL049873.1-201ENST00000480540 376 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC069439.1-201ENST00000494739 167 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 EIF4EP3-201ENST00000498782 656 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 MTCO3P9-201ENST00000506989 781 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 RNU6-143P-201ENST00000516942 93 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC234778.2-201ENST00000566241 354 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 MIR4424-201ENST00000585257 86 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AL162713.1-201ENST00000604480 262 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC002076.2-201ENST00000617362 122 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AL512643.1-201ENST00000635735 524 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AL359693.1-201ENST00000614959 2407 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 AC022336.2-201ENST00000568966 2538 ntBASIC3.45□□□□□ -1.86
HMGB4Q8WW32 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGB4Q8WW32 ASNSP3-201ENST00000451989 1306 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 RNU6-140P-201ENST00000384566 108 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 Z98941.1-201ENST00000407764 100 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 USP9YP6-201ENST00000413550 854 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 SNRPEP4-201ENST00000435815 279 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 RPS15AP34-201ENST00000487776 387 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 RNU4-29P-201ENST00000515943 174 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AL137161.1-201ENST00000532231 390 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AC008962.1-201ENST00000605729 304 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AC103710.3-201ENST00000608157 948 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 RMST_3.1-201ENST00000611651 109 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AL162274.2-201ENST00000614406 332 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AF117829.1-206ENST00000621883 3802 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AC024614.3-201ENST00000637860 256 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 AL136164.4-201ENST00000625013 2135 ntBASIC3.44□□□□□ -1.86
HMGB4Q8WW32 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HMGB4Q8WW32 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms