Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AL136380.1-201ENST00000447970 162 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC004924.1-201ENST00000480160 781 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC139453.3-201ENST00000493276 369 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.58□□□□□ -2
CCDC197Q8NCU1 SCARNA24.1-201ENST00000516465 137 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 RNU1-103P-201ENST00000516502 125 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 RNU6-703P-201ENST00000516946 107 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC009812.2-201ENST00000517657 457 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC090572.1-201ENST00000519251 160 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC137800.2-201ENST00000574375 120 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 AP005136.1-201ENST00000579765 429 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 RPL12P50-201ENST00000603116 116 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 BNIP3P9-201ENST00000603714 553 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 AL137843.1-201ENST00000605078 385 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC110994.2-201ENST00000635481 492 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC197Q8NCU1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC197Q8NCU1 AL161912.2-201ENST00000565707 3007 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 Y_RNA.201-201ENST00000364052 96 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 SNORD116-9-201ENST00000384000 95 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 SNORD116-2-201ENST00000384274 95 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 SNORD116-3-201ENST00000384287 95 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 SNORD116-1-201ENST00000384335 95 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 RNU6-348P-201ENST00000384386 107 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 SNORD116-7-201ENST00000384404 95 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 SNORD116-5-201ENST00000384462 95 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 SNORD116-6-201ENST00000384711 96 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 RNA5SP354-201ENST00000391247 136 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 RPL7P37-201ENST00000425095 738 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC097713.2-201ENST00000430199 356 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC244505.5-201ENST00000443639 207 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC093899.1-201ENST00000457984 376 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 RPL31P3-201ENST00000458430 332 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC107222.1-201ENST00000510899 637 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC117532.1-201ENST00000514638 323 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 MTND4LP31-201ENST00000514859 294 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 RNU6-914P-201ENST00000516749 109 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 CKS1BP7-201ENST00000522230 235 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AP003072.2-201ENST00000527756 676 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC087241.2-201ENST00000535801 324 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC025281.1-201ENST00000567026 265 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC010546.1-201ENST00000569391 485 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AL645944.1-201ENST00000603857 493 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AL355598.1-201ENST00000604169 202 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC135507.1-201ENST00000607214 561 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC011890.2-201ENST00000613393 294 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 AC110491.1-201ENST00000562191 2010 ntBASIC2.57□□□□□ -2
CCDC197Q8NCU1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.57□□□□□ -2
CCDC197Q8NCU1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC197Q8NCU1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC197Q8NCU1 SNORA63.1-201ENST00000362493 131 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 RNY1P12-201ENST00000364251 105 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.56□□□□□ -2
CCDC197Q8NCU1 SNORA75-201ENST00000384158 137 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 MIR141-201ENST00000384975 95 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AL162578.1-201ENST00000406202 378 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 RNU6ATAC-201ENST00000408749 126 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 RNU2-39P-201ENST00000410604 198 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 RNU2-25P-201ENST00000411041 191 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AF274854.1-201ENST00000413236 615 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC114491.1-201ENST00000416095 246 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC098614.2-201ENST00000426040 255 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC197Q8NCU1 RPL31P35-201ENST00000431058 377 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 RPL23AP30-201ENST00000432419 501 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 HMGN2P31-201ENST00000432430 273 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AL591704.1-201ENST00000432574 275 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC098831.1-201ENST00000440661 216 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC011816.1-201ENST00000441346 546 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 Z83846.1-201ENST00000446798 265 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 MTND1P27-201ENST00000451117 902 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 AC009220.1-201ENST00000451614 275 ntBASIC2.56□□□□□ -2
CCDC197Q8NCU1 MTATP6P7-201ENST00000453315 681 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms