Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 FAM157A-202ENST00000615155 405 ntBASIC4.86□□□□□ -1.63
USP48Q86UV5 AL512643.1-201ENST00000635735 524 ntBASIC4.86□□□□□ -1.63
USP48Q86UV5 Z99571.1-201ENST00000636677 394 ntBASIC4.86□□□□□ -1.63
USP48Q86UV5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.86□□□□□ -1.63
USP48Q86UV5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.86□□□□□ -1.63
USP48Q86UV5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
USP48Q86UV5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP48Q86UV5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
USP48Q86UV5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP48Q86UV5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
USP48Q86UV5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP48Q86UV5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP48Q86UV5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP48Q86UV5 SNORA60-201ENST00000362396 134 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 Y_RNA.111-201ENST00000363248 100 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 Y_RNA.135-201ENST00000363439 95 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 SNORA33.2-201ENST00000365413 134 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 Y_RNA.480-201ENST00000384364 102 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.85□□□□□ -1.63
USP48Q86UV5 AC063979.1-201ENST00000415539 377 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 RPL21P90-201ENST00000415692 466 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.85□□□□□ -1.63
USP48Q86UV5 MTND1P17-201ENST00000448961 204 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 AC117503.1-201ENST00000472241 394 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 RPS27P27-201ENST00000498779 255 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 AC009901.1-201ENST00000506703 541 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 RNU6-1170P-201ENST00000515974 106 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.85□□□□□ -1.63
USP48Q86UV5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP48Q86UV5 MIR4298-201ENST00000584380 73 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP48Q86UV5 AL670379.10-201ENST00000604330 253 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 AL670379.9-201ENST00000605428 253 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 AL080274.1-201ENST00000605565 220 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 AC124303.1-201ENST00000605703 360 ntBASIC4.85□□□□□ -1.63
USP48Q86UV5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.85□□□□□ -1.63
USP48Q86UV5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.85□□□□□ -1.63
USP48Q86UV5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP48Q86UV5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP48Q86UV5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP48Q86UV5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
USP48Q86UV5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 MARK2P15-201ENST00000432204 2186 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.84□□□□□ -1.63
USP48Q86UV5 ZNF519P1-201ENST00000449011 1626 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 RNU6-512P-201ENST00000364438 103 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 MIR607-201ENST00000385241 96 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 MIR301A-201ENST00000385261 86 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 RPL21P17-201ENST00000397467 475 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 AC245054.2-201ENST00000415639 319 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 FABP5P14-201ENST00000437273 393 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 RPL32P28-201ENST00000443577 397 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 Y_RNA.631-201ENST00000459607 101 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 AP000873.1-201ENST00000463987 400 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 PPIAP15-201ENST00000479662 484 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 AL163540.1-201ENST00000485382 386 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.84□□□□□ -1.63
USP48Q86UV5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.84□□□□□ -1.63
USP48Q86UV5 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.84□□□□□ -1.63
USP48Q86UV5 IGKV2-38-201ENST00000517443 247 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 RNU6-323P-201ENST00000521915 107 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 IMMP1LP2-201ENST00000552954 492 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.84□□□□□ -1.63
USP48Q86UV5 AC006504.6-201ENST00000590142 199 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 AL161798.1-201ENST00000604630 131 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 AC084781.2-201ENST00000615568 161 ntBASIC4.84□□□□□ -1.63
USP48Q86UV5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.84□□□□□ -1.63
USP48Q86UV5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
USP48Q86UV5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
USP48Q86UV5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
USP48Q86UV5 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP48Q86UV5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP48Q86UV5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP48Q86UV5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP48Q86UV5 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.83□□□□□ -1.64
USP48Q86UV5 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.83□□□□□ -1.64
USP48Q86UV5 RNU6-562P-201ENST00000362731 107 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 RNA5SP189-201ENST00000364920 115 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 Y_RNA.395-201ENST00000383945 109 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 RNY4P36-201ENST00000391116 96 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.83□□□□□ -1.64
USP48Q86UV5 AL590383.1-201ENST00000428602 75 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 AC011742.1-201ENST00000431448 434 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 AC073063.1-201ENST00000434352 607 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 MTND3P2-201ENST00000438452 342 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.83□□□□□ -1.64
USP48Q86UV5 RNU7-152P-201ENST00000458982 64 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 HMGB3P15-201ENST00000507326 574 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 AC005921.1-201ENST00000510589 286 ntBASIC4.83□□□□□ -1.64
USP48Q86UV5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms