Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.1□□□□□ -1.91
TRNP1Q6NT89 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.1□□□□□ -1.91
TRNP1Q6NT89 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.1□□□□□ -1.91
TRNP1Q6NT89 MIR3200-201ENST00000580767 85 ntBASIC3.1□□□□□ -1.91
TRNP1Q6NT89 AL161756.2-201ENST00000604597 246 ntBASIC3.1□□□□□ -1.91
TRNP1Q6NT89 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.1□□□□□ -1.91
TRNP1Q6NT89 AC130324.3-201ENST00000614165 542 ntBASIC3.1□□□□□ -1.91
TRNP1Q6NT89 AC010338.1-201ENST00000621823 717 ntBASIC3.1□□□□□ -1.91
TRNP1Q6NT89 AC011155.2-201ENST00000623202 216 ntBASIC3.1□□□□□ -1.91
TRNP1Q6NT89 AC048347.1-201ENST00000624621 427 ntBASIC3.1□□□□□ -1.91
TRNP1Q6NT89 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.1□□□□□ -1.91
TRNP1Q6NT89 MIR3662-201ENST00000637030 95 ntBASIC3.1□□□□□ -1.91
TRNP1Q6NT89 AC024614.3-201ENST00000637860 256 ntBASIC3.1□□□□□ -1.91
TRNP1Q6NT89 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRNP1Q6NT89 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRNP1Q6NT89 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRNP1Q6NT89 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRNP1Q6NT89 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 MIR422A-201ENST00000362286 90 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 SNORA71.1-201ENST00000364523 117 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 SNORD115-7-201ENST00000365306 82 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 HSPE1P26-201ENST00000405341 275 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AL451054.2-201ENST00000420896 202 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 HMGB1P31-201ENST00000437242 427 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 MTATP6P23-201ENST00000440153 476 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 MTND4P25-201ENST00000441039 533 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 DDX3P2-201ENST00000446138 111 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 MTND1P18-201ENST00000448191 573 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AC073415.1-201ENST00000449240 153 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AL118520.1-201ENST00000450770 291 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 VN1R17P-201ENST00000472048 1090 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AL163973.1-201ENST00000484753 577 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AC104806.1-201ENST00000508720 308 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 RPL23AP84-201ENST00000571193 464 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 MTCO3P24-201ENST00000572729 782 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AP002826.1-201ENST00000608835 315 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 AC024940.5-201ENST00000622889 474 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 FER-210ENST00000628534 558 ntTSL 5 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 MIR4275-201ENST00000636486 87 ntBASIC3.09□□□□□ -1.91
TRNP1Q6NT89 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRNP1Q6NT89 GABRG2-229ENST00000641017 3628 ntBASIC3.09□□□□□ -1.92
TRNP1Q6NT89 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.09□□□□□ -1.92
TRNP1Q6NT89 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRNP1Q6NT89 API5P2-201ENST00000397055 1498 ntBASIC3.09□□□□□ -1.92
TRNP1Q6NT89 CKAP2P1-201ENST00000555477 2049 ntBASIC3.09□□□□□ -1.92
TRNP1Q6NT89 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 Y_RNA.255-201ENST00000364581 97 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 SNORD37.1-201ENST00000390968 65 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AL139397.2-201ENST00000404529 772 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 RNA5SP274-201ENST00000410484 108 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 OR9R1P-201ENST00000412200 877 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 RPL27AP8-201ENST00000424277 446 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 WASF1P1-201ENST00000447560 1131 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AL356010.1-201ENST00000456364 102 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 RNU6-261P-201ENST00000459506 102 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 RPL7P5-201ENST00000471472 736 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 PRDX4P1-201ENST00000507189 574 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AL359273.1-201ENST00000510918 627 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 RNU6-123P-201ENST00000516163 102 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 RNU6-1256P-201ENST00000516539 103 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 RNA5SP503-201ENST00000517047 117 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 RN7SKP258-201ENST00000517151 304 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AC002545.1-201ENST00000592511 181 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AL670379.4-201ENST00000605279 254 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AL020991.1-201ENST00000612314 373 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 AC007998.5-201ENST00000622938 237 ntBASIC3.08□□□□□ -1.92
TRNP1Q6NT89 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRNP1Q6NT89 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms