Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 GABPAP-201ENST00000419271 1356 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
KRT40Q6A162 RNU6-82P-201ENST00000363970 107 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 SNORA63C-201ENST00000364578 129 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.16□□□□□ -1.74
KRT40Q6A162 RNY4P36-201ENST00000391116 96 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 RAC1P6-201ENST00000423911 575 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 AC006989.1-201ENST00000427212 131 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 Z82205.1-201ENST00000428456 297 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 AC005019.1-201ENST00000436455 431 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 AC234775.1-201ENST00000454247 670 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.16□□□□□ -1.74
KRT40Q6A162 SCARNA18-201ENST00000459004 134 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 AC027575.1-201ENST00000481064 460 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 FTH1P9-201ENST00000513251 355 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.16□□□□□ -1.74
KRT40Q6A162 RNU6-1045P-201ENST00000516321 107 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.16□□□□□ -1.74
KRT40Q6A162 APOOP3-201ENST00000536787 586 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 MIR3672-201ENST00000584290 82 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 AC092747.3-201ENST00000603769 301 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 AL450472.3-201ENST00000615578 367 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 AL589994.2-201ENST00000621124 579 ntBASIC4.16□□□□□ -1.74
KRT40Q6A162 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.16□□□□□ -1.74
KRT40Q6A162 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.16□□□□□ -1.74
KRT40Q6A162 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRT40Q6A162 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRT40Q6A162 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRT40Q6A162 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
KRT40Q6A162 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KRT40Q6A162 MTCO1P24-201ENST00000515438 1558 ntBASIC4.15□□□□□ -1.74
KRT40Q6A162 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KRT40Q6A162 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KRT40Q6A162 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.15□□□□□ -1.75
KRT40Q6A162 AC007685.1-201ENST00000329806 452 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 Y_RNA.128-201ENST00000363391 112 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 SNORA4.3-201ENST00000365564 137 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 RNU6-701P-201ENST00000384059 107 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 MIR606-201ENST00000384851 96 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 RPL5P18-201ENST00000406671 891 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 RN7SKP158-201ENST00000410453 326 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 RNU6-712P-201ENST00000410558 100 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.15□□□□□ -1.75
KRT40Q6A162 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 GPM6BP2-201ENST00000432046 144 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 AC236972.1-201ENST00000433225 199 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.15□□□□□ -1.75
KRT40Q6A162 RPS29P31-201ENST00000446147 164 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 GPM6BP1-201ENST00000446387 144 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 Y_RNA.635-201ENST00000459041 101 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.15□□□□□ -1.75
KRT40Q6A162 RPL21P8-201ENST00000465083 535 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 TRBVA-201ENST00000498804 316 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 RN7SKP18-201ENST00000516005 275 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 RNU6-566P-201ENST00000516790 107 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 RNU6-579P-201ENST00000516879 102 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.15□□□□□ -1.75
KRT40Q6A162 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.15□□□□□ -1.75
KRT40Q6A162 AP006245.1-201ENST00000522549 120 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.15□□□□□ -1.75
KRT40Q6A162 AP001330.4-201ENST00000604350 154 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 AL080274.1-201ENST00000605565 220 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 MIR8058-201ENST00000615737 89 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 AC110801.1-201ENST00000623590 212 ntBASIC4.15□□□□□ -1.75
KRT40Q6A162 MTND4P27-201ENST00000450813 1354 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRT40Q6A162 AC007823.1-201ENST00000569932 1566 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT40Q6A162 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRT40Q6A162 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT40Q6A162 RNU6-254P-201ENST00000363377 107 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 SNORD113-7-201ENST00000363762 77 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 MIR1250-201ENST00000408098 113 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT40Q6A162 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT40Q6A162 MTCO2P27-201ENST00000420740 428 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AC090774.1-201ENST00000435925 246 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 RPL29P29-201ENST00000448725 423 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AP000926.1-201ENST00000479573 241 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRT40Q6A162 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT40Q6A162 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRT40Q6A162 AC026801.2-201ENST00000515352 425 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 RNU6-123P-201ENST00000516163 102 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 RNU6-256P-201ENST00000516747 97 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 RANP9-201ENST00000519957 271 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AC103783.1-201ENST00000520506 373 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 HMGN1P28-201ENST00000521340 364 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT40Q6A162 COPS8P3-201ENST00000526024 482 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AP000763.2-201ENST00000540641 163 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AC012182.1-201ENST00000570133 895 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRT40Q6A162 AL670379.6-201ENST00000603753 252 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AC008162.1-201ENST00000604718 254 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AL670379.1-201ENST00000604752 252 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AL137843.1-201ENST00000605078 385 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AL670379.5-201ENST00000605253 252 ntBASIC4.14□□□□□ -1.75
KRT40Q6A162 AL670379.8-201ENST00000605353 252 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms