Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 MYL12BP1-201ENST00000569826 507 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 RPL23AP87-202ENST00000573039 466 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC087499.8-201ENST00000578406 226 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 LRRC37A5P-203ENST00000580181 585 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC092447.9-201ENST00000603395 144 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC104695.3-201ENST00000604052 296 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC091167.4-201ENST00000605079 184 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 HMGN2P28-201ENST00000606102 262 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC100812.1-201ENST00000607622 580 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC005344.1-201ENST00000613391 459 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AL138825.1-201ENST00000618587 192 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AL031601.2-202ENST00000622650 282 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 AC083843.3-201ENST00000623679 2186 ntBASIC5.09□□□□□ -1.59
USPL1Q5W0Q7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
USPL1Q5W0Q7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.09□□□□□ -1.6
USPL1Q5W0Q7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
USPL1Q5W0Q7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.09□□□□□ -1.6
USPL1Q5W0Q7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
USPL1Q5W0Q7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 Y_RNA.152-201ENST00000363578 100 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 Y_RNA.153-201ENST00000363615 91 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 Y_RNA.380-201ENST00000365663 111 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 Y_RNA.476-201ENST00000384347 108 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 MIR517A-201ENST00000385001 87 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 RNU6-101P-201ENST00000410323 104 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 RNU2-23P-201ENST00000410545 195 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AL513331.1-201ENST00000411908 397 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AC243428.1-201ENST00000421099 264 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 HLA-N-201ENST00000437516 135 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 DAP3P1-201ENST00000441522 278 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AC068781.1-201ENST00000488231 618 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AC009901.1-201ENST00000506703 541 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AC008489.1-201ENST00000524271 483 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AL591516.1-201ENST00000611326 274 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AC096577.2-201ENST00000611455 153 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AC064801.1-201ENST00000612025 407 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AC009812.4-201ENST00000569134 1805 ntBASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
USPL1Q5W0Q7 AC139713.2-215ENST00000641428 5037 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 Z73965.1-201ENST00000623412 2297 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 SET-203ENST00000372688 801 ntTSL 2 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 Y_RNA.389-201ENST00000383924 113 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 Y_RNA.645-201ENST00000391229 102 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 RPL21P17-201ENST00000397467 475 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 RNU6-607P-201ENST00000411283 108 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 EIF4EP1-201ENST00000422311 642 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 DPH3P2-201ENST00000422618 250 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 RPL26P6-201ENST00000440913 438 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 AC022795.1-201ENST00000473808 480 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 AC008716.1-201ENST00000511084 513 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 RNU6-635P-201ENST00000516651 102 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 CYP4A43P-201ENST00000568156 121 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 MIR3200-201ENST00000580767 85 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 ELOCP5-201ENST00000604924 333 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 RNU6-85P-201ENST00000605989 107 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 AC107294.1-201ENST00000609524 467 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 AL606534.2-204ENST00000635008 178 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 MIR6715B-201ENST00000637172 77 ntBASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.07□□□□□ -1.6
USPL1Q5W0Q7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.06□□□□□ -1.6
USPL1Q5W0Q7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
USPL1Q5W0Q7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
USPL1Q5W0Q7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.06□□□□□ -1.6
USPL1Q5W0Q7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms