Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL049779.4-201ENST00000604500 156 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AC105129.3-201ENST00000605455 485 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AC093838.1-201ENST00000613014 469 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AC010329.5-201ENST00000623497 2174 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-500P-201ENST00000362349 107 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 RNU5F-6P-201ENST00000362979 116 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 MIR764-201ENST00000390811 85 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AL109755.1-201ENST00000401791 649 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 RNA5SP425-201ENST00000410336 112 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-920P-201ENST00000410926 92 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 RPL23AP39-201ENST00000415533 405 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 RPS27AP14-201ENST00000422868 454 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AL365184.2-201ENST00000431139 435 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 PIGFP3-201ENST00000441918 722 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC104389.3-201ENST00000445629 235 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 MRPL42P6-201ENST00000486397 371 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC010486.2-201ENST00000505572 483 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 NDUFB4P2-201ENST00000509515 391 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC022634.1-201ENST00000520765 532 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 ATP5F1P5-201ENST00000526403 760 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 ROCK1P1-201ENST00000573767 549 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC108747.1-201ENST00000609508 535 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AL360219.1-201ENST00000610230 366 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC004223.4-201ENST00000612426 332 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 SDR42E1P2-201ENST00000614861 481 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC027807.2-201ENST00000616099 408 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AF246928.1-201ENST00000623768 87 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC010297.1-201ENST00000623948 149 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC007494.3-201ENST00000624660 743 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC093591.3-201ENST00000634516 308 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 AC093536.2-201ENST00000565257 1406 ntBASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SHROOM1Q2M3G4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 MIR21-201ENST00000362134 72 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 SNORA38-201ENST00000363946 132 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-501P-201ENST00000364072 100 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-270P-201ENST00000364131 105 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC099548.1-201ENST00000421443 426 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 RPL7P34-201ENST00000433316 712 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC098826.1-201ENST00000433943 471 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 RPL22P17-201ENST00000438729 315 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AL512286.1-201ENST00000439244 400 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 Z82210.1-201ENST00000440037 231 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 MTND1P26-201ENST00000440488 538 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC118469.1-201ENST00000442943 488 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 MTCO3P45-201ENST00000443036 613 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 ST13P20-201ENST00000447996 1065 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 FDX1P2-201ENST00000450769 375 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC011753.1-201ENST00000451001 220 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 KATNBL1P6-201ENST00000453433 915 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 RPL23AP49-201ENST00000492925 468 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC114786.4-201ENST00000508771 728 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC022447.1-201ENST00000515358 464 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-64P-201ENST00000517119 105 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 NRON-201ENST00000517270 370 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AP002748.2-201ENST00000528671 348 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 DUXAP5-201ENST00000529668 529 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AP000873.5-201ENST00000533906 236 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC145350.1-201ENST00000567426 208 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC002400.1-201ENST00000569310 726 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 MIR4648-201ENST00000580107 72 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 MIR3117-201ENST00000584034 78 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC002545.1-201ENST00000592511 181 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 WISP1-OT1-201ENST00000602893 642 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC098826.3-201ENST00000603823 466 ntBASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.75□□□□□ -1.97
SHROOM1Q2M3G4 AC004908.2-201ENST00000609090 574 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms