Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 EI24P1-201ENST00000416584 867 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 SSXP9-201ENST00000417503 292 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 MTCO1P39-201ENST00000426148 480 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 MRPS10P2-201ENST00000431226 381 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 GPR143P-201ENST00000434155 205 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AC004866.2-201ENST00000438285 481 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AL121769.1-201ENST00000469473 401 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AC005921.1-201ENST00000510589 286 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 RNU4-29P-201ENST00000515943 174 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 SNORA9.3-201ENST00000516383 129 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 OR5AQ1P-201ENST00000527596 927 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AC125611.2-201ENST00000551907 647 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 HMGB1P33-201ENST00000563485 527 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AC105224.1-201ENST00000587055 421 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AL020991.1-201ENST00000612314 373 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.28□□□□□ -1.88
PDS5AQ29RF7 TUG1_2.1-201ENST00000614234 87 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AC007014.2-201ENST00000615581 479 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AL353746.1-201ENST00000566293 6881 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 ASNSP3-201ENST00000451989 1306 ntBASIC3.28□□□□□ -1.88
PDS5AQ29RF7 AL136360.1-201ENST00000503377 1900 ntBASIC3.28□□□□□ -1.89
PDS5AQ29RF7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 Y_RNA.248-201ENST00000364501 109 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 Y_RNA.450-201ENST00000384198 113 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 Y_RNA.481-201ENST00000384373 102 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 RNU6-456P-201ENST00000384493 107 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 RNU2-37P-201ENST00000410695 177 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 MTND1P23-201ENST00000416931 372 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 MTATP6P18-201ENST00000417994 673 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 PPP1R11P2-201ENST00000423543 382 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AC093151.1-201ENST00000427711 313 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 MTATP6P30-201ENST00000443540 664 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AC079781.2-201ENST00000446424 169 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 MTND2P24-201ENST00000453434 806 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AC079382.1-201ENST00000493346 557 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 RNU6-718P-201ENST00000516166 105 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 SCARNA24.1-201ENST00000516465 137 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 SNORA31.20-201ENST00000517111 133 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AL512310.1-201ENST00000548639 172 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 SUB1P2-201ENST00000556401 297 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 SNORD84-203ENST00000584275 78 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 NRBF2P5-201ENST00000603087 788 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AL022099.1-201ENST00000604551 712 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AC005609.4-201ENST00000625071 447 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 MIR4275-201ENST00000636486 87 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 MTND5P7-201ENST00000413558 1798 ntBASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDS5AQ29RF7 AC108206.1-201ENST00000570186 4159 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 HSPE1P11-201ENST00000339579 310 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 RNU6-1120P-201ENST00000362988 108 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 RNU6-1085P-201ENST00000363576 107 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 SNORA7.2-201ENST00000364446 145 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 U3.12-201ENST00000364498 214 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 RNU4-12P-201ENST00000365233 139 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 RNU1-39P-201ENST00000383897 165 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 Y_RNA.409-201ENST00000383990 98 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 MIR181B1-201ENST00000385240 110 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 SNORD115-47-201ENST00000391226 86 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 BMS1P22-201ENST00000414726 313 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 UBE2FP1-201ENST00000416536 447 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 AL353193.1-201ENST00000421444 268 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.26□□□□□ -1.89
PDS5AQ29RF7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.26□□□□□ -1.89
PDS5AQ29RF7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.26□□□□□ -1.89
PDS5AQ29RF7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.26□□□□□ -1.89
PDS5AQ29RF7 RPS24P6-201ENST00000452670 400 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 AC022364.2-201ENST00000457963 554 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.26□□□□□ -1.89
PDS5AQ29RF7 RPL23AP55-201ENST00000498163 452 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 Y_RNA.693-201ENST00000516641 110 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 SNORA31.21-201ENST00000517180 77 ntBASIC3.26□□□□□ -1.89
PDS5AQ29RF7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.26□□□□□ -1.89
PDS5AQ29RF7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PDS5AQ29RF7 AC123904.3-201ENST00000547218 814 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms