Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AL139286.2-201ENST00000606838 396 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 OR10AB1P-201ENST00000609613 938 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.39□□□□□ -2.03
CKAP4Q07065 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CKAP4Q07065 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CKAP4Q07065 AC008669.1-201ENST00000565823 2178 ntBASIC2.39□□□□□ -2.03
CKAP4Q07065 AL138713.1-201ENST00000624026 2130 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CKAP4Q07065 RNU6-1155P-201ENST00000363554 107 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 SNORA51.11-201ENST00000384442 131 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 RNU6-114P-201ENST00000384704 105 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.38□□□□□ -2.03
CKAP4Q07065 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.38□□□□□ -2.03
CKAP4Q07065 MTND1P23-201ENST00000416931 372 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.38□□□□□ -2.03
CKAP4Q07065 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.38□□□□□ -2.03
CKAP4Q07065 AC009961.2-201ENST00000435771 251 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 MTND1P34-201ENST00000438556 671 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.38□□□□□ -2.03
CKAP4Q07065 RPL22P17-201ENST00000438729 315 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.38□□□□□ -2.03
CKAP4Q07065 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.38□□□□□ -2.03
CKAP4Q07065 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.38□□□□□ -2.03
CKAP4Q07065 RNU6-717P-201ENST00000459076 104 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.38□□□□□ -2.03
CKAP4Q07065 RPL23AP70-201ENST00000483361 460 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 RPL23AP41-201ENST00000484754 458 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CKAP4Q07065 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CKAP4Q07065 AC008716.1-201ENST00000511084 513 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 SNORA70.16-201ENST00000516390 95 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 RNA5SP24-201ENST00000516478 95 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC022616.6-201ENST00000520479 119 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.38□□□□□ -2.03
CKAP4Q07065 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.38□□□□□ -2.03
CKAP4Q07065 AC123904.2-201ENST00000548059 300 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.38□□□□□ -2.03
CKAP4Q07065 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.38□□□□□ -2.03
CKAP4Q07065 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.38□□□□□ -2.03
CKAP4Q07065 AL356432.3-201ENST00000568952 465 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC060771.1-201ENST00000582031 164 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 MIR5007-201ENST00000583098 95 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 HMGN1P30-201ENST00000589286 268 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC091805.2-201ENST00000603848 235 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 RNU6-87P-201ENST00000607561 108 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC006566.1-201ENST00000608943 513 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC245517.5-201ENST00000611529 162 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.38□□□□□ -2.03
CKAP4Q07065 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC008250.2-201ENST00000615261 205 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AC015540.1-201ENST00000615828 501 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 AP000553.5-201ENST00000641933 54 ntBASIC2.38□□□□□ -2.03
CKAP4Q07065 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.37□□□□□ -2.03
CKAP4Q07065 AC010680.1-201ENST00000590024 3590 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.37□□□□□ -2.03
CKAP4Q07065 U8.3-201ENST00000363321 132 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 RNU6-173P-201ENST00000364215 104 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CKAP4Q07065 Y_RNA.517-201ENST00000384551 106 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 MIR34A-201ENST00000385130 110 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 RNU6-192P-201ENST00000391253 100 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AL136372.1-201ENST00000403060 228 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AL356967.1-201ENST00000406305 431 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 CCNG1P1-201ENST00000406783 885 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 FCF1P10-201ENST00000407590 479 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.37□□□□□ -2.03
CKAP4Q07065 MTND1P21-201ENST00000412991 285 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.37□□□□□ -2.03
CKAP4Q07065 BEND7P1-201ENST00000422058 457 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AL589872.1-201ENST00000426602 288 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.37□□□□□ -2.03
CKAP4Q07065 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.37□□□□□ -2.03
CKAP4Q07065 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.37□□□□□ -2.03
CKAP4Q07065 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.37□□□□□ -2.03
CKAP4Q07065 DNAJC19P4-201ENST00000440115 345 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.37□□□□□ -2.03
CKAP4Q07065 AC092473.1-201ENST00000441098 221 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CKAP4Q07065 GAPDHP17-201ENST00000449858 1001 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.37□□□□□ -2.03
CKAP4Q07065 KLF3P2-201ENST00000465138 268 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.37□□□□□ -2.03
CKAP4Q07065 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.37□□□□□ -2.03
CKAP4Q07065 NDUFB4P2-201ENST00000509515 391 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.37□□□□□ -2.03
CKAP4Q07065 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.37□□□□□ -2.03
CKAP4Q07065 RNU2-46P-201ENST00000517038 113 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 IGLV3-17-201ENST00000519099 244 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 MTCYBP20-201ENST00000524239 1129 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AC021269.2-201ENST00000532318 330 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.37□□□□□ -2.03
CKAP4Q07065 AC009063.1-201ENST00000563342 702 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.37□□□□□ -2.03
CKAP4Q07065 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.37□□□□□ -2.03
CKAP4Q07065 MIR3118-1-201ENST00000581787 76 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 ELOCP29-201ENST00000588193 334 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.37□□□□□ -2.03
CKAP4Q07065 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.37□□□□□ -2.03
CKAP4Q07065 AC068790.6-201ENST00000602558 258 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AP001429.1-201ENST00000602568 530 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms