Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC006366.1-201ENST00000422002 759 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 AL356320.1-201ENST00000429616 163 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 MTATP6P17-201ENST00000431030 672 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.77□□□□□ -1.97
GABPAQ06546 AC098826.1-201ENST00000433943 471 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 AL121890.1-201ENST00000435457 205 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 ARPC3P1-201ENST00000437218 533 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.77□□□□□ -1.97
GABPAQ06546 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.77□□□□□ -1.97
GABPAQ06546 AC233702.1-201ENST00000482905 502 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 AC109486.1-201ENST00000486833 374 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.77□□□□□ -1.97
GABPAQ06546 RNU6-927P-201ENST00000516199 100 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 RNA5SP290-201ENST00000517133 127 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.77□□□□□ -1.97
GABPAQ06546 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
GABPAQ06546 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.77□□□□□ -1.97
GABPAQ06546 ELOCP31-201ENST00000540463 467 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 OSBPL9P5-201ENST00000542581 171 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.77□□□□□ -1.97
GABPAQ06546 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.77□□□□□ -1.97
GABPAQ06546 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.77□□□□□ -1.97
GABPAQ06546 AC025281.1-201ENST00000567026 265 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.77□□□□□ -1.97
GABPAQ06546 MIR548AB-201ENST00000584917 84 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 U73023.1-201ENST00000603134 700 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.77□□□□□ -1.97
GABPAQ06546 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
GABPAQ06546 AC008147.4-201ENST00000617570 1204 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 AC009878.1-201ENST00000621819 340 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 AC091953.2-201ENST00000623979 160 ntBASIC2.77□□□□□ -1.97
GABPAQ06546 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.77□□□□□ -1.97
GABPAQ06546 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.77□□□□□ -1.97
GABPAQ06546 AC092104.1-201ENST00000497346 1441 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
GABPAQ06546 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
GABPAQ06546 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.76□□□□□ -1.97
GABPAQ06546 RNU6-1027P-201ENST00000383998 107 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 RNU6-701P-201ENST00000384059 107 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 MRPL42P2-201ENST00000403169 426 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 AL591416.1-201ENST00000404015 867 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 NDUFS5P1-201ENST00000405668 289 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 RNA5SP425-201ENST00000410336 112 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 AC007064.1-201ENST00000412238 351 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
GABPAQ06546 ZNF863P-201ENST00000426746 417 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 AL139415.2-201ENST00000431968 163 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 RPS12P2-201ENST00000439728 269 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.76□□□□□ -1.97
GABPAQ06546 AC092798.1-201ENST00000458542 409 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
GABPAQ06546 MTND3P7-201ENST00000474435 343 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 RPS29P21-201ENST00000496272 170 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.76□□□□□ -1.97
GABPAQ06546 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
GABPAQ06546 AP003181.2-201ENST00000528941 181 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 AC007834.2-201ENST00000536310 343 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.76□□□□□ -1.97
GABPAQ06546 AC012065.4-201ENST00000602445 679 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 DUXAP4-201ENST00000603046 613 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 AC136601.2-201ENST00000604356 474 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 RNU6-87P-201ENST00000607561 108 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 uc_338.12-201ENST00000616344 181 ntBASIC2.76□□□□□ -1.97
GABPAQ06546 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.76□□□□□ -1.97
GABPAQ06546 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.76□□□□□ -1.97
GABPAQ06546 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
GABPAQ06546 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.76□□□□□ -1.97
GABPAQ06546 MTND4P4-201ENST00000439033 1366 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.75□□□□□ -1.97
GABPAQ06546 MIR21-201ENST00000362134 72 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 Y_RNA.245-201ENST00000364493 95 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 AC010153.1-201ENST00000432862 727 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 AC129850.1-201ENST00000436203 508 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 RPL39P40-201ENST00000445481 146 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.75□□□□□ -1.97
GABPAQ06546 RPL12P25-201ENST00000455592 494 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 AC116337.2-201ENST00000477662 156 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 AC138853.1-201ENST00000503549 823 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 RN7SKP258-201ENST00000517151 304 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 MTCO1P47-201ENST00000523889 1271 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 AC022878.1-201ENST00000530684 149 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.75□□□□□ -1.97
GABPAQ06546 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.75□□□□□ -1.97
GABPAQ06546 AC112191.3-201ENST00000604371 277 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 AL627309.6-201ENST00000606857 840 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 AC239868.4-201ENST00000608318 671 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.75□□□□□ -1.97
GABPAQ06546 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.75□□□□□ -1.97
GABPAQ06546 AC092447.7-201ENST00000422212 1621 ntBASIC2.75□□□□□ -1.97
GABPAQ06546 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
GABPAQ06546 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.74□□□□□ -1.97
GABPAQ06546 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 U8.2-201ENST00000363156 134 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 RNU6-217P-201ENST00000384164 104 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
GABPAQ06546 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 AL135786.1-201ENST00000415892 214 ntBASIC2.74□□□□□ -1.97
GABPAQ06546 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.74□□□□□ -1.97
GABPAQ06546 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms