Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2□□□□□ -2.09
CLDN18P56856 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2□□□□□ -2.09
CLDN18P56856 AL160394.1-201ENST00000624765 724 ntBASIC2□□□□□ -2.09
CLDN18P56856 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLDN18P56856 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLDN18P56856 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLDN18P56856 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLDN18P56856 AL109809.4-201ENST00000603520 2185 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CLDN18P56856 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN18P56856 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN18P56856 CIR1P3-201ENST00000405137 479 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN18P56856 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN18P56856 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.99□□□□□ -2.09
CLDN18P56856 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN18P56856 AC096638.1-201ENST00000444678 216 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 RPL7P12-201ENST00000446719 750 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 OR6C5P-201ENST00000452388 923 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
CLDN18P56856 RPS29P21-201ENST00000496272 170 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 AC096571.1-202ENST00000506634 735 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 AF213884.2-201ENST00000510417 903 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN18P56856 CYCSP26-201ENST00000534107 320 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.99□□□□□ -2.09
CLDN18P56856 MIR3126-201ENST00000577443 74 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN18P56856 AL138963.2-201ENST00000605137 226 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 AC087241.4-201ENST00000612441 480 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.99□□□□□ -2.09
CLDN18P56856 AL109620.1-201ENST00000618738 1197 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 AL121895.2-201ENST00000619558 447 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN18P56856 AL031601.2-202ENST00000622650 282 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 MIR6873-201ENST00000622788 63 ntBASIC1.99□□□□□ -2.09
CLDN18P56856 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN18P56856 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN18P56856 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN18P56856 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN18P56856 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLDN18P56856 NACAP2-201ENST00000318548 624 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 FAM133CP-201ENST00000332869 704 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLDN18P56856 MIR1302-8-201ENST00000408342 128 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 USP9YP6-201ENST00000413550 854 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN18P56856 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN18P56856 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN18P56856 EEF1A1P39-201ENST00000440791 250 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 MTCO1P27-201ENST00000448269 226 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AC092001.1-201ENST00000453012 261 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 RPL21P134-201ENST00000453468 483 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN18P56856 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN18P56856 AC104982.1-201ENST00000478775 574 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 RPL36AP48-201ENST00000485521 314 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 RPL9P6-201ENST00000492764 598 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AC139453.3-201ENST00000493276 369 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AC026801.1-201ENST00000497178 464 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN18P56856 SMURF2P1-201ENST00000514992 481 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 RNA5SP216-201ENST00000516111 123 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 RNU6-581P-201ENST00000516214 105 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 RNA5SP200-201ENST00000516360 103 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 RNU6-143P-201ENST00000516942 93 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.98□□□□□ -2.09
CLDN18P56856 ROCK1P1-201ENST00000573767 549 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 MIR4648-201ENST00000580107 72 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.98□□□□□ -2.09
CLDN18P56856 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.98□□□□□ -2.09
CLDN18P56856 NRBF2P1-201ENST00000587407 859 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.98□□□□□ -2.09
CLDN18P56856 AL355297.2-201ENST00000604792 129 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AC116312.1-201ENST00000606841 314 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AC009831.4-201ENST00000620744 325 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 AL138960.2-201ENST00000625145 535 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 Z75746.1-201ENST00000440243 2080 ntBASIC1.98□□□□□ -2.09
CLDN18P56856 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.98□□□□□ -2.09
CLDN18P56856 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLDN18P56856 AC005336.3-201ENST00000623833 2679 ntBASIC1.97□□□□□ -2.09
CLDN18P56856 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLDN18P56856 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLDN18P56856 MIR19A-201ENST00000384878 82 ntBASIC1.97□□□□□ -2.09
CLDN18P56856 AC119751.3-201ENST00000399720 670 ntBASIC1.97□□□□□ -2.09
CLDN18P56856 AL359634.1-202ENST00000404721 284 ntBASIC1.97□□□□□ -2.09
CLDN18P56856 U3.40-201ENST00000408706 208 ntBASIC1.97□□□□□ -2.09
CLDN18P56856 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN18P56856 RPS24P7-201ENST00000416921 246 ntBASIC1.97□□□□□ -2.09
CLDN18P56856 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN18P56856 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN18P56856 FABP5P15-201ENST00000453566 214 ntBASIC1.97□□□□□ -2.09
CLDN18P56856 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.97□□□□□ -2.09
CLDN18P56856 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN18P56856 AC104090.1-201ENST00000506341 1171 ntBASIC1.97□□□□□ -2.09
CLDN18P56856 MRPS33P3-201ENST00000513456 322 ntBASIC1.97□□□□□ -2.09
CLDN18P56856 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.97□□□□□ -2.09
CLDN18P56856 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.97□□□□□ -2.09
CLDN18P56856 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms