Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC006504.3-201ENST00000586818 523 ntBASIC3.01□□□□□ -1.93
APOBEC1P41238 AC136601.2-201ENST00000604356 474 ntBASIC3.01□□□□□ -1.93
APOBEC1P41238 AC068944.2-201ENST00000610373 403 ntBASIC3.01□□□□□ -1.93
APOBEC1P41238 AC019176.2-201ENST00000611579 315 ntBASIC3.01□□□□□ -1.93
APOBEC1P41238 YWHAEP7-203ENST00000622054 312 ntBASIC3.01□□□□□ -1.93
APOBEC1P41238 PLCE1P1-201ENST00000622094 305 ntBASIC3.01□□□□□ -1.93
APOBEC1P41238 FER-210ENST00000628534 558 ntTSL 5 BASIC3.01□□□□□ -1.93
APOBEC1P41238 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.01□□□□□ -1.93
APOBEC1P41238 AL512643.1-201ENST00000635735 524 ntBASIC3.01□□□□□ -1.93
APOBEC1P41238 Z99571.1-201ENST00000636677 394 ntBASIC3.01□□□□□ -1.93
APOBEC1P41238 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
APOBEC1P41238 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBEC1P41238 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
APOBEC1P41238 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.01□□□□□ -1.93
APOBEC1P41238 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
APOBEC1P41238 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3□□□□□ -1.93
APOBEC1P41238 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3□□□□□ -1.93
APOBEC1P41238 AL139276.1-201ENST00000311910 1001 ntBASIC3□□□□□ -1.93
APOBEC1P41238 RNU6-552P-201ENST00000362869 119 ntBASIC3□□□□□ -1.93
APOBEC1P41238 RNU6-116P-201ENST00000384042 109 ntBASIC3□□□□□ -1.93
APOBEC1P41238 MIR7-3-201ENST00000384898 110 ntBASIC3□□□□□ -1.93
APOBEC1P41238 RNU6-903P-201ENST00000391270 109 ntBASIC3□□□□□ -1.93
APOBEC1P41238 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3□□□□□ -1.93
APOBEC1P41238 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3□□□□□ -1.93
APOBEC1P41238 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3□□□□□ -1.93
APOBEC1P41238 AC000111.3-201ENST00000433478 193 ntBASIC3□□□□□ -1.93
APOBEC1P41238 AC104058.1-201ENST00000448028 297 ntBASIC3□□□□□ -1.93
APOBEC1P41238 AL118520.1-201ENST00000450770 291 ntBASIC3□□□□□ -1.93
APOBEC1P41238 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3□□□□□ -1.93
APOBEC1P41238 FABP5P15-201ENST00000453566 214 ntBASIC3□□□□□ -1.93
APOBEC1P41238 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3□□□□□ -1.93
APOBEC1P41238 RPL21P13-201ENST00000488305 481 ntBASIC3□□□□□ -1.93
APOBEC1P41238 EIF4EP3-201ENST00000498782 656 ntBASIC3□□□□□ -1.93
APOBEC1P41238 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3□□□□□ -1.93
APOBEC1P41238 RNA5SP401-201ENST00000515920 127 ntBASIC3□□□□□ -1.93
APOBEC1P41238 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3□□□□□ -1.93
APOBEC1P41238 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3□□□□□ -1.93
APOBEC1P41238 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3□□□□□ -1.93
APOBEC1P41238 AP005435.4-201ENST00000529514 284 ntBASIC3□□□□□ -1.93
APOBEC1P41238 MIR5047-201ENST00000579212 100 ntBASIC3□□□□□ -1.93
APOBEC1P41238 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3□□□□□ -1.93
APOBEC1P41238 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3□□□□□ -1.93
APOBEC1P41238 AL157817.1-201ENST00000614264 790 ntBASIC3□□□□□ -1.93
APOBEC1P41238 MIR8058-201ENST00000615737 89 ntBASIC3□□□□□ -1.93
APOBEC1P41238 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3□□□□□ -1.93
APOBEC1P41238 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3□□□□□ -1.93
APOBEC1P41238 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3□□□□□ -1.93
APOBEC1P41238 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
APOBEC1P41238 AC091152.2-201ENST00000591628 2569 ntBASIC3□□□□□ -1.93
APOBEC1P41238 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3□□□□□ -1.93
APOBEC1P41238 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
APOBEC1P41238 MTCO1P12-201ENST00000414273 1543 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
APOBEC1P41238 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.99□□□□□ -1.93
APOBEC1P41238 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
APOBEC1P41238 RPL7P26-201ENST00000333817 754 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 Y_RNA.256-201ENST00000364594 104 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 RNU6-877P-201ENST00000383868 107 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 RNU6-217P-201ENST00000384164 104 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 MIR490-201ENST00000384865 128 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 SNORD37.1-201ENST00000390968 65 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 RNU6-550P-201ENST00000391057 101 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 SNORA48.7-201ENST00000391302 135 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 RNU6-908P-201ENST00000410160 94 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 RN7SKP27-201ENST00000410684 333 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 RNA5SP31-201ENST00000411144 127 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.99□□□□□ -1.93
APOBEC1P41238 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.99□□□□□ -1.93
APOBEC1P41238 AL160275.3-201ENST00000423876 471 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.99□□□□□ -1.93
APOBEC1P41238 GTF2IP20-201ENST00000431663 360 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 AL159987.2-201ENST00000432754 307 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 BX679664.1-201ENST00000434429 253 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 CST9LP2-201ENST00000437612 320 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 CECR9-201ENST00000453421 199 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 HMGN1P18-201ENST00000457642 277 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 SNRPFP3-201ENST00000457792 225 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 RN7SL442P-201ENST00000473804 320 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.99□□□□□ -1.93
APOBEC1P41238 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.99□□□□□ -1.93
APOBEC1P41238 MIR4444-1-201ENST00000581696 74 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 MIR4444-2-201ENST00000584390 74 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 BNIP3P30-201ENST00000601184 574 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 RBM11P1-201ENST00000604951 799 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 AC004805.2-201ENST00000605382 482 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 AC073657.2-201ENST00000605661 303 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 AL138880.2-201ENST00000616214 239 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 MIR6075-201ENST00000620782 95 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 AC006111.3-201ENST00000622137 383 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 AC073476.4-201ENST00000628409 72 ntBASIC2.99□□□□□ -1.93
APOBEC1P41238 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.99□□□□□ -1.93
APOBEC1P41238 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.99□□□□□ -1.93
APOBEC1P41238 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
APOBEC1P41238 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.99□□□□□ -1.93
APOBEC1P41238 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
APOBEC1P41238 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
APOBEC1P41238 Y_RNA.89-201ENST00000363031 102 ntBASIC2.98□□□□□ -1.93
APOBEC1P41238 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.98□□□□□ -1.93
APOBEC1P41238 Y_RNA.248-201ENST00000364501 109 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms