Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RN7SL542P-201ENST00000467147 294 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 RN7SL132P-201ENST00000478131 296 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.91□□□□□ -1.62
ERCC3P19447 AC116337.1-201ENST00000509680 687 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 SNORA67.7-201ENST00000516664 135 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 RNU6-1016P-201ENST00000516689 94 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 RNU6-928P-201ENST00000516876 104 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 RNU6-1213P-201ENST00000517075 94 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC3P19447 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.91□□□□□ -1.62
ERCC3P19447 MIR4286-201ENST00000580651 93 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 AC133104.2-201ENST00000615272 193 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 RMST_4.1-201ENST00000616886 107 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC3P19447 AC090740.1-201ENST00000623193 2262 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 EOGT-210ENST00000615922 1931 ntBASIC4.91□□□□□ -1.62
ERCC3P19447 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC3P19447 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC3P19447 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC3P19447 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC3P19447 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
ERCC3P19447 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
ERCC3P19447 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
ERCC3P19447 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
ERCC3P19447 SNORD62.1-201ENST00000362541 86 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 Y_RNA.138-201ENST00000363462 102 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 Y_RNA.146-201ENST00000363549 102 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 RNU6-790P-201ENST00000384479 105 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 SNORA40C-201ENST00000391285 128 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 HMGN2P30-201ENST00000423237 256 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 AC098614.2-201ENST00000426040 255 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 AC007389.2-201ENST00000434630 306 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 RNU7-187P-201ENST00000458985 68 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 SNRPGP3-201ENST00000469405 227 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.9□□□□□ -1.63
ERCC3P19447 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.9□□□□□ -1.63
ERCC3P19447 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ERCC3P19447 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.9□□□□□ -1.63
ERCC3P19447 AC100830.2-201ENST00000581636 240 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ERCC3P19447 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.9□□□□□ -1.63
ERCC3P19447 BNIP3P22-201ENST00000593399 556 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 AL645944.1-201ENST00000603857 493 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 AC019193.3-201ENST00000609144 554 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 FTX_3.1-201ENST00000610451 147 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 AC006133.1-201ENST00000617106 264 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 AC019278.1-201ENST00000623516 479 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.9□□□□□ -1.63
ERCC3P19447 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
ERCC3P19447 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ERCC3P19447 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.9□□□□□ -1.63
ERCC3P19447 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC3P19447 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
ERCC3P19447 RNA5SP307-201ENST00000362863 116 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 RNU6-166P-201ENST00000384371 107 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC3P19447 SNORA74C-2-201ENST00000411179 201 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 AC108032.1-201ENST00000416706 207 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC3P19447 AL353729.1-201ENST00000425044 720 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 RPL7P2-201ENST00000427639 268 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 AC097713.2-201ENST00000430199 356 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 RPL23AP81-201ENST00000455252 467 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 RPL23AP62-201ENST00000463396 453 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 AC006445.2-201ENST00000510061 472 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 RNU1-103P-201ENST00000516502 125 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC3P19447 AL442663.2-201ENST00000554385 511 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.89□□□□□ -1.63
ERCC3P19447 MIR3158-1-201ENST00000583596 81 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.89□□□□□ -1.63
ERCC3P19447 AC008121.1-201ENST00000603244 268 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 AC007938.3-201ENST00000604965 623 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 AC010201.1-201ENST00000605051 540 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 Z98200.1-201ENST00000607298 470 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 AC007546.2-201ENST00000623996 360 ntBASIC4.89□□□□□ -1.63
ERCC3P19447 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC3P19447 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC3P19447 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC3P19447 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC3P19447 AC106871.1-201ENST00000568324 3102 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC3P19447 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
ERCC3P19447 Y_RNA.151-201ENST00000363566 112 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 RNU6-1188P-201ENST00000363795 107 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 RNU6-884P-201ENST00000363889 107 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 RNU6-593P-201ENST00000364716 112 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 RNU6-933P-201ENST00000384424 107 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 MIR554-201ENST00000384874 96 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 SNORA75.4-201ENST00000391278 119 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 RNA5SP39-201ENST00000411245 120 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.88□□□□□ -1.63
ERCC3P19447 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC3P19447 AC093303.1-201ENST00000514549 295 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 RNU1-45P-201ENST00000517191 141 ntBASIC4.88□□□□□ -1.63
ERCC3P19447 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.88□□□□□ -1.63
ERCC3P19447 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.88□□□□□ -1.63
ERCC3P19447 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC3P19447 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
ERCC3P19447 RN7SL703P-201ENST00000578485 302 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms