Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNA5SP56-201ENST00000410277 118 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 RNU6-130P-201ENST00000411112 103 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 AC096920.1-201ENST00000423991 241 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM13O60858 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM13O60858 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM13O60858 AC009643.1-201ENST00000532030 391 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 RPS29P30-201ENST00000600975 111 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 MZT1P2-201ENST00000604387 248 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 ELOCP5-201ENST00000604924 333 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 AL161637.1-201ENST00000622380 412 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 AL450472.1-202ENST00000637286 180 ntBASIC4.18□□□□□ -1.74
TRIM13O60858 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM13O60858 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM13O60858 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM13O60858 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM13O60858 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM13O60858 RNU6-989P-201ENST00000362756 107 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 Y_RNA.54-201ENST00000362766 105 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 Y_RNA.83-201ENST00000363005 113 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RNY1P16-201ENST00000363063 111 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RNU6-704P-201ENST00000364162 103 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RNU6-1279P-201ENST00000383917 103 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RNU6-1027P-201ENST00000383998 107 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RNA5SP87-201ENST00000384155 118 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 MIR625-201ENST00000385047 85 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 MIR613-201ENST00000385248 95 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RPS4XP7-201ENST00000406274 780 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RPL21P24-201ENST00000413752 448 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM13O60858 RPEP5-201ENST00000441137 268 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RPL29P29-201ENST00000448725 423 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM13O60858 PPIAP3-201ENST00000450588 505 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RPL23AP81-201ENST00000455252 467 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RNU7-169P-201ENST00000459456 61 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 RPL7P49-201ENST00000471402 708 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AC069499.1-201ENST00000489433 509 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AC135721.1-201ENST00000497954 479 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM13O60858 AC144568.1-201ENST00000520139 137 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 CBX3P8-201ENST00000532412 525 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM13O60858 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM13O60858 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM13O60858 AL670379.6-201ENST00000603753 252 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AL670379.1-201ENST00000604752 252 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AL670379.5-201ENST00000605253 252 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AL670379.8-201ENST00000605353 252 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AL670379.7-201ENST00000605823 252 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AC002044.1-201ENST00000606707 158 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.17□□□□□ -1.74
TRIM13O60858 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM13O60858 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TRIM13O60858 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM13O60858 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TRIM13O60858 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM13O60858 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM13O60858 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM13O60858 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM13O60858 AL592437.2-201ENST00000421655 2434 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM13O60858 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM13O60858 AL137003.2-201ENST00000606924 2538 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 AC138393.1-203ENST00000327086 343 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 MIR331-201ENST00000362302 94 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 Y_RNA.277-201ENST00000364754 102 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 SNORA3C-201ENST00000408792 125 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 TMSB10P2-201ENST00000416049 131 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM13O60858 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM13O60858 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM13O60858 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM13O60858 RPS29P26-201ENST00000477483 171 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 RPL21P103-201ENST00000479921 488 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 AC107393.1-201ENST00000512403 346 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 RNU6-911P-201ENST00000516523 104 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 CDH12P4-201ENST00000517835 295 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 CDH12P3-201ENST00000517935 295 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 CDH12P1-201ENST00000518435 295 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM13O60858 AC100870.1-201ENST00000522035 505 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM13O60858 AL161616.1-201ENST00000611867 286 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 MIR6862-1-201ENST00000613016 70 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 MIR6862-2-201ENST00000614755 70 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 MIR7155-201ENST00000615925 56 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 uc_338.13-201ENST00000618243 179 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 AL356489.2-201ENST00000566968 3528 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM13O60858 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM13O60858 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM13O60858 AC010300.1-201ENST00000600671 5134 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM13O60858 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM13O60858 AL133243.3-201ENST00000617415 3004 ntBASIC4.16□□□□□ -1.74
TRIM13O60858 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM13O60858 AC116667.1-201ENST00000604855 2072 ntBASIC4.15□□□□□ -1.74
TRIM13O60858 AL139811.1-201ENST00000424779 2299 ntBASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms