Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MTND1P12-201ENST00000455231 147 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 HMGN1P12-201ENST00000499125 195 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC093809.1-201ENST00000509155 340 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC117522.1-201ENST00000509821 380 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC026412.2-201ENST00000512270 1075 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC010493.1-201ENST00000513479 292 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CACNA1FO60840 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC011468.4-201ENST00000603942 409 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC091965.4-201ENST00000607691 587 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC009033.1-201ENST00000624279 431 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 MIR3688-2-201ENST00000636963 87 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC138649.5-201ENST00000637456 137 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CACNA1FO60840 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CACNA1FO60840 MTND5P28-201ENST00000438005 1594 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CACNA1FO60840 HMGB1P17-201ENST00000403495 628 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 CIR1P3-201ENST00000405137 479 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 Y_RNA.608-201ENST00000410647 95 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 RNU4-55P-201ENST00000410731 137 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 RPS3AP9-201ENST00000417027 792 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC016831.2-201ENST00000417179 352 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 ATG3P1-201ENST00000419507 911 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 MTND1P14-201ENST00000427400 950 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 RPL22P17-201ENST00000438729 315 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 TRBV26-201ENST00000456572 344 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 PABPC1P3-201ENST00000469174 459 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC234781.5-201ENST00000508429 271 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC006445.2-201ENST00000510061 472 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 RNU6-358P-201ENST00000516564 75 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.01□□□□□ -1.93
CACNA1FO60840 AC012507.3-201ENST00000603556 477 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AL645944.1-201ENST00000603857 493 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AL355472.4-201ENST00000610233 626 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AL590282.1-201ENST00000610379 1136 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 AC002553.4-201ENST00000616896 331 ntBASIC3.01□□□□□ -1.93
CACNA1FO60840 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CACNA1FO60840 CUL1P1-201ENST00000509510 2425 ntBASIC3□□□□□ -1.93
CACNA1FO60840 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3□□□□□ -1.93
CACNA1FO60840 RNU6-1322P-201ENST00000364309 107 ntBASIC3□□□□□ -1.93
CACNA1FO60840 Y_RNA.295-201ENST00000364918 102 ntBASIC3□□□□□ -1.93
CACNA1FO60840 U8.8-201ENST00000365399 135 ntBASIC3□□□□□ -1.93
CACNA1FO60840 MIR1-2-201ENST00000384961 85 ntBASIC3□□□□□ -1.93
CACNA1FO60840 RPS4XP7-201ENST00000406274 780 ntBASIC3□□□□□ -1.93
CACNA1FO60840 MIR1305-201ENST00000408300 86 ntBASIC3□□□□□ -1.93
CACNA1FO60840 MTCO1P17-201ENST00000411522 491 ntBASIC3□□□□□ -1.93
CACNA1FO60840 SPA17P1-201ENST00000416656 452 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AL109913.1-201ENST00000421173 514 ntBASIC3□□□□□ -1.93
CACNA1FO60840 OOSP1P1-201ENST00000423265 274 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3□□□□□ -1.93
CACNA1FO60840 MTCO2P11-201ENST00000431069 680 ntBASIC3□□□□□ -1.93
CACNA1FO60840 ARPC3P5-201ENST00000448802 534 ntBASIC3□□□□□ -1.93
CACNA1FO60840 PSPHP1-201ENST00000450062 261 ntBASIC3□□□□□ -1.93
CACNA1FO60840 RPL21P104-201ENST00000464143 478 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC108860.1-201ENST00000484521 383 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3□□□□□ -1.93
CACNA1FO60840 AC114981.1-201ENST00000503897 678 ntBASIC3□□□□□ -1.93
CACNA1FO60840 HMGB1P29-201ENST00000505659 499 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC114797.1-201ENST00000514003 728 ntBASIC3□□□□□ -1.93
CACNA1FO60840 RNU6-202P-201ENST00000515998 96 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC107934.1-201ENST00000522215 217 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3□□□□□ -1.93
CACNA1FO60840 AP003181.2-201ENST00000528941 181 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AP002770.2-201ENST00000543613 532 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC090616.5-202ENST00000582111 297 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC091135.1-201ENST00000585943 307 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC007938.3-201ENST00000604965 623 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC093788.1-201ENST00000609356 927 ntBASIC3□□□□□ -1.93
CACNA1FO60840 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3□□□□□ -1.93
CACNA1FO60840 DUXAP9-208ENST00000622815 614 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC010297.1-201ENST00000623948 149 ntBASIC3□□□□□ -1.93
CACNA1FO60840 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3□□□□□ -1.93
CACNA1FO60840 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
CACNA1FO60840 AL354685.2-201ENST00000448218 1447 ntBASIC3□□□□□ -1.93
CACNA1FO60840 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CACNA1FO60840 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3□□□□□ -1.93
CACNA1FO60840 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3□□□□□ -1.93
CACNA1FO60840 RNA5SP456-201ENST00000364002 114 ntBASIC3□□□□□ -1.93
CACNA1FO60840 RNU6-534P-201ENST00000364877 106 ntBASIC3□□□□□ -1.93
CACNA1FO60840 RNU6-1293P-201ENST00000384077 107 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3□□□□□ -1.93
CACNA1FO60840 EI24P1-201ENST00000416584 867 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms