Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RNA5SP118-201ENST00000410385 109 ntBASIC3.43□□□□□ -1.86
MSI1O43347 RNU2-29P-201ENST00000410423 189 ntBASIC3.43□□□□□ -1.86
MSI1O43347 RNU6-193P-201ENST00000410977 107 ntBASIC3.43□□□□□ -1.86
MSI1O43347 RPL21P66-201ENST00000426566 466 ntBASIC3.43□□□□□ -1.86
MSI1O43347 ELOCP23-201ENST00000452014 332 ntBASIC3.43□□□□□ -1.86
MSI1O43347 CEACAMP4-201ENST00000457676 421 ntBASIC3.43□□□□□ -1.86
MSI1O43347 RNU7-180P-201ENST00000459240 63 ntBASIC3.43□□□□□ -1.86
MSI1O43347 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.43□□□□□ -1.86
MSI1O43347 RPL23AP62-201ENST00000463396 453 ntBASIC3.43□□□□□ -1.86
MSI1O43347 RPL38P4-201ENST00000502376 214 ntBASIC3.43□□□□□ -1.86
MSI1O43347 AC117522.3-201ENST00000507974 584 ntBASIC3.43□□□□□ -1.86
MSI1O43347 AC104806.1-201ENST00000508720 308 ntBASIC3.43□□□□□ -1.86
MSI1O43347 AC025465.4-201ENST00000513422 638 ntBASIC3.43□□□□□ -1.86
MSI1O43347 SNORA31.8-201ENST00000516327 108 ntBASIC3.43□□□□□ -1.86
MSI1O43347 RNA5SP309-201ENST00000516670 106 ntBASIC3.43□□□□□ -1.86
MSI1O43347 RNU6-685P-201ENST00000517088 95 ntBASIC3.43□□□□□ -1.86
MSI1O43347 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.43□□□□□ -1.86
MSI1O43347 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.43□□□□□ -1.86
MSI1O43347 PSMA2P1-201ENST00000526365 646 ntBASIC3.43□□□□□ -1.86
MSI1O43347 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.43□□□□□ -1.86
MSI1O43347 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.43□□□□□ -1.86
MSI1O43347 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.43□□□□□ -1.86
MSI1O43347 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.43□□□□□ -1.86
MSI1O43347 MIR4424-201ENST00000585257 86 ntBASIC3.43□□□□□ -1.86
MSI1O43347 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.43□□□□□ -1.86
MSI1O43347 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.43□□□□□ -1.86
MSI1O43347 BNIP3P9-201ENST00000603714 553 ntBASIC3.43□□□□□ -1.86
MSI1O43347 AL365204.3-201ENST00000612448 685 ntBASIC3.43□□□□□ -1.86
MSI1O43347 AC012409.4-201ENST00000612923 249 ntBASIC3.43□□□□□ -1.86
MSI1O43347 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.43□□□□□ -1.86
MSI1O43347 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.43□□□□□ -1.86
MSI1O43347 U6.114-201ENST00000636407 96 ntBASIC3.43□□□□□ -1.86
MSI1O43347 OR4G1P-203ENST00000641984 1631 ntBASIC3.43□□□□□ -1.86
MSI1O43347 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MSI1O43347 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.43□□□□□ -1.86
MSI1O43347 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
MSI1O43347 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MSI1O43347 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
MSI1O43347 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.42□□□□□ -1.86
MSI1O43347 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
MSI1O43347 AC058791.1-201ENST00000608412 3198 ntBASIC3.42□□□□□ -1.86
MSI1O43347 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.42□□□□□ -1.86
MSI1O43347 SNORA31-201ENST00000362607 130 ntBASIC3.42□□□□□ -1.86
MSI1O43347 Y_RNA.279-201ENST00000364763 95 ntBASIC3.42□□□□□ -1.86
MSI1O43347 RNA5SP189-201ENST00000364920 115 ntBASIC3.42□□□□□ -1.86
MSI1O43347 RNA5SP167-201ENST00000365461 116 ntBASIC3.42□□□□□ -1.86
MSI1O43347 MIR514A2-201ENST00000385131 88 ntBASIC3.42□□□□□ -1.86
MSI1O43347 MIR514A3-201ENST00000385132 88 ntBASIC3.42□□□□□ -1.86
MSI1O43347 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
MSI1O43347 RNU6-550P-201ENST00000391057 101 ntBASIC3.42□□□□□ -1.86
MSI1O43347 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.42□□□□□ -1.86
MSI1O43347 RPL21P111-201ENST00000418453 477 ntBASIC3.42□□□□□ -1.86
MSI1O43347 RPL7P46-201ENST00000425129 740 ntBASIC3.42□□□□□ -1.86
MSI1O43347 SRIP2-201ENST00000428470 166 ntBASIC3.42□□□□□ -1.86
MSI1O43347 MTND5P20-201ENST00000448677 143 ntBASIC3.42□□□□□ -1.86
MSI1O43347 RPS27P29-201ENST00000463110 252 ntBASIC3.42□□□□□ -1.86
MSI1O43347 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.42□□□□□ -1.86
MSI1O43347 RPL32P34-201ENST00000486380 400 ntBASIC3.42□□□□□ -1.86
MSI1O43347 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.42□□□□□ -1.86
MSI1O43347 AC023141.12-201ENST00000512399 199 ntBASIC3.42□□□□□ -1.86
MSI1O43347 RNU4-29P-201ENST00000515943 174 ntBASIC3.42□□□□□ -1.86
MSI1O43347 RNU6-507P-201ENST00000516045 100 ntBASIC3.42□□□□□ -1.86
MSI1O43347 Y_RNA.702-201ENST00000516843 96 ntBASIC3.42□□□□□ -1.86
MSI1O43347 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.42□□□□□ -1.86
MSI1O43347 CENPUP1-201ENST00000526649 1202 ntBASIC3.42□□□□□ -1.86
MSI1O43347 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.42□□□□□ -1.86
MSI1O43347 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
MSI1O43347 RPL23AP84-201ENST00000571193 464 ntBASIC3.42□□□□□ -1.86
MSI1O43347 MIR5583-1-201ENST00000580941 59 ntBASIC3.42□□□□□ -1.86
MSI1O43347 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.42□□□□□ -1.86
MSI1O43347 BNIP3P10-201ENST00000605360 577 ntBASIC3.42□□□□□ -1.86
MSI1O43347 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.42□□□□□ -1.86
MSI1O43347 AC012531.5-201ENST00000611375 151 ntBASIC3.42□□□□□ -1.86
MSI1O43347 AL442067.2-201ENST00000614033 363 ntBASIC3.42□□□□□ -1.86
MSI1O43347 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.42□□□□□ -1.86
MSI1O43347 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.42□□□□□ -1.86
MSI1O43347 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.42□□□□□ -1.86
MSI1O43347 AC103710.2-202ENST00000641454 2853 ntBASIC3.41□□□□□ -1.86
MSI1O43347 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
MSI1O43347 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
MSI1O43347 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
MSI1O43347 RNA5SP293-201ENST00000410527 113 ntBASIC3.41□□□□□ -1.86
MSI1O43347 RNU6-55P-201ENST00000411092 107 ntBASIC3.41□□□□□ -1.86
MSI1O43347 RNU6-954P-201ENST00000411355 107 ntBASIC3.41□□□□□ -1.86
MSI1O43347 RPL7L1P10-201ENST00000427790 463 ntBASIC3.41□□□□□ -1.86
MSI1O43347 BX679664.1-201ENST00000434429 253 ntBASIC3.41□□□□□ -1.86
MSI1O43347 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.41□□□□□ -1.86
MSI1O43347 MTND3P16-201ENST00000452205 344 ntBASIC3.41□□□□□ -1.86
MSI1O43347 RN7SL442P-201ENST00000473804 320 ntBASIC3.41□□□□□ -1.86
MSI1O43347 MTCO3P9-201ENST00000506989 781 ntBASIC3.41□□□□□ -1.86
MSI1O43347 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MSI1O43347 RNU6-123P-201ENST00000516163 102 ntBASIC3.41□□□□□ -1.86
MSI1O43347 SNORA70.16-201ENST00000516390 95 ntBASIC3.41□□□□□ -1.86
MSI1O43347 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.41□□□□□ -1.86
MSI1O43347 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.41□□□□□ -1.86
MSI1O43347 HIGD1AP1-201ENST00000550979 275 ntBASIC3.41□□□□□ -1.86
MSI1O43347 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.41□□□□□ -1.86
MSI1O43347 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.41□□□□□ -1.86
MSI1O43347 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.41□□□□□ -1.86
MSI1O43347 AC104763.2-201ENST00000604179 382 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms