Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.44□□□□□ -2.02
MSH4O15457 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.44□□□□□ -2.02
MSH4O15457 AC004805.2-201ENST00000605382 482 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AC245517.5-201ENST00000611529 162 ntBASIC2.44□□□□□ -2.02
MSH4O15457 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AC090970.3-201ENST00000612566 866 ntBASIC2.44□□□□□ -2.02
MSH4O15457 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.44□□□□□ -2.02
MSH4O15457 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
MSH4O15457 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.43□□□□□ -2.02
MSH4O15457 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
MSH4O15457 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
MSH4O15457 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
MSH4O15457 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.43□□□□□ -2.02
MSH4O15457 SNORA67.3-201ENST00000384366 140 ntBASIC2.43□□□□□ -2.02
MSH4O15457 AL356057.2-201ENST00000403318 432 ntBASIC2.43□□□□□ -2.02
MSH4O15457 RN7SKP32-201ENST00000410167 303 ntBASIC2.43□□□□□ -2.02
MSH4O15457 RN7SKP192-201ENST00000411291 327 ntBASIC2.43□□□□□ -2.02
MSH4O15457 BX682237.1-201ENST00000415016 335 ntBASIC2.43□□□□□ -2.02
MSH4O15457 HIGD1AP15-201ENST00000416198 280 ntBASIC2.43□□□□□ -2.02
MSH4O15457 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.43□□□□□ -2.02
MSH4O15457 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.43□□□□□ -2.02
MSH4O15457 AC098614.2-201ENST00000426040 255 ntBASIC2.43□□□□□ -2.02
MSH4O15457 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.43□□□□□ -2.02
MSH4O15457 ELOCP14-201ENST00000428070 331 ntBASIC2.43□□□□□ -2.02
MSH4O15457 RPS15AP5-201ENST00000436276 388 ntBASIC2.43□□□□□ -2.02
MSH4O15457 CR769767.1-201ENST00000436337 346 ntBASIC2.43□□□□□ -2.02
MSH4O15457 ELOCP7-201ENST00000439968 331 ntBASIC2.43□□□□□ -2.02
MSH4O15457 CECR9-201ENST00000453421 199 ntBASIC2.43□□□□□ -2.02
MSH4O15457 RPL37P6-201ENST00000460682 294 ntBASIC2.43□□□□□ -2.02
MSH4O15457 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MSH4O15457 AC105252.1-201ENST00000503089 286 ntBASIC2.43□□□□□ -2.02
MSH4O15457 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
MSH4O15457 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.43□□□□□ -2.02
MSH4O15457 AC113155.1-201ENST00000511141 769 ntBASIC2.43□□□□□ -2.02
MSH4O15457 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
MSH4O15457 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.43□□□□□ -2.02
MSH4O15457 AL359212.1-201ENST00000556608 614 ntBASIC2.43□□□□□ -2.02
MSH4O15457 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.43□□□□□ -2.02
MSH4O15457 AL356432.3-201ENST00000568952 465 ntBASIC2.43□□□□□ -2.02
MSH4O15457 MIR4648-201ENST00000580107 72 ntBASIC2.43□□□□□ -2.02
MSH4O15457 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.43□□□□□ -2.02
MSH4O15457 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.43□□□□□ -2.02
MSH4O15457 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.43□□□□□ -2.02
MSH4O15457 AC079395.3-201ENST00000615161 484 ntBASIC2.43□□□□□ -2.02
MSH4O15457 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
MSH4O15457 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
MSH4O15457 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.42□□□□□ -2.02
MSH4O15457 Y_RNA.46-201ENST00000362695 102 ntBASIC2.42□□□□□ -2.02
MSH4O15457 RNU6-1284P-201ENST00000363701 100 ntBASIC2.42□□□□□ -2.02
MSH4O15457 SNORA48.3-201ENST00000391081 134 ntBASIC2.42□□□□□ -2.02
MSH4O15457 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.42□□□□□ -2.02
MSH4O15457 U3.37-201ENST00000408528 213 ntBASIC2.42□□□□□ -2.02
MSH4O15457 SNORA11.4-201ENST00000408823 129 ntBASIC2.42□□□□□ -2.02
MSH4O15457 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH4O15457 RNU2-49P-201ENST00000410666 184 ntBASIC2.42□□□□□ -2.02
MSH4O15457 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.42□□□□□ -2.02
MSH4O15457 AL121890.1-201ENST00000435457 205 ntBASIC2.42□□□□□ -2.02
MSH4O15457 TIMM9P1-201ENST00000436122 256 ntBASIC2.42□□□□□ -2.02
MSH4O15457 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH4O15457 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH4O15457 AC004263.1-201ENST00000479327 332 ntBASIC2.42□□□□□ -2.02
MSH4O15457 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.42□□□□□ -2.02
MSH4O15457 AC116347.2-201ENST00000514912 523 ntBASIC2.42□□□□□ -2.02
MSH4O15457 RNU6-678P-201ENST00000516832 109 ntBASIC2.42□□□□□ -2.02
MSH4O15457 RNA5SP471-201ENST00000516971 106 ntBASIC2.42□□□□□ -2.02
MSH4O15457 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH4O15457 GLYCAM1-201ENST00000546596 285 ntBASIC2.42□□□□□ -2.02
MSH4O15457 LRRC37A5P-203ENST00000580181 585 ntBASIC2.42□□□□□ -2.02
MSH4O15457 AC022022.2-201ENST00000602989 360 ntBASIC2.42□□□□□ -2.02
MSH4O15457 AC098826.3-201ENST00000603823 466 ntBASIC2.42□□□□□ -2.02
MSH4O15457 AL161798.1-201ENST00000604630 131 ntBASIC2.42□□□□□ -2.02
MSH4O15457 AC013562.2-201ENST00000611632 603 ntBASIC2.42□□□□□ -2.02
MSH4O15457 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MSH4O15457 MIR6132-201ENST00000622083 109 ntBASIC2.42□□□□□ -2.02
MSH4O15457 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.42□□□□□ -2.02
MSH4O15457 MTND5P29-201ENST00000458676 1807 ntBASIC2.42□□□□□ -2.02
MSH4O15457 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MSH4O15457 Y_RNA.97-201ENST00000363094 102 ntBASIC2.41□□□□□ -2.02
MSH4O15457 MIR627-201ENST00000384979 97 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AL139397.2-201ENST00000404529 772 ntBASIC2.41□□□□□ -2.02
MSH4O15457 NDUFS5P1-201ENST00000405668 289 ntBASIC2.41□□□□□ -2.02
MSH4O15457 RNU2-25P-201ENST00000411041 191 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.41□□□□□ -2.02
MSH4O15457 AC023141.4-201ENST00000412031 328 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.41□□□□□ -2.02
MSH4O15457 RPL23AP39-201ENST00000415533 405 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.41□□□□□ -2.02
MSH4O15457 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.41□□□□□ -2.02
MSH4O15457 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.41□□□□□ -2.02
MSH4O15457 XKRYP1-201ENST00000423438 492 ntBASIC2.41□□□□□ -2.02
MSH4O15457 Z98742.2-201ENST00000431564 187 ntBASIC2.41□□□□□ -2.02
MSH4O15457 XKRYP2-201ENST00000432915 492 ntBASIC2.41□□□□□ -2.02
MSH4O15457 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AC009961.3-201ENST00000449832 765 ntBASIC2.41□□□□□ -2.02
MSH4O15457 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MSH4O15457 RPL23AP70-201ENST00000483361 460 ntBASIC2.41□□□□□ -2.02
MSH4O15457 YWHAEP4-201ENST00000505390 198 ntBASIC2.41□□□□□ -2.02
MSH4O15457 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.41□□□□□ -2.02
MSH4O15457 SNORA3.4-201ENST00000515969 96 ntBASIC2.41□□□□□ -2.02
MSH4O15457 RNA5SP165-201ENST00000517142 115 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms