Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HMGN4O00479 MIR424-201ENST00000362227 98 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
HMGN4O00479 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
HMGN4O00479 SNORD51-201ENST00000384320 80 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 MIR30A-201ENST00000385092 71 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 HMGB1P17-201ENST00000403495 628 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AL355615.1-201ENST00000406187 641 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 RNU2-63P-201ENST00000410792 194 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGN4O00479 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGN4O00479 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.8□□□□□ -2.28
HMGN4O00479 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGN4O00479 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGN4O00479 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 RPL26P6-201ENST00000440913 438 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AC068135.1-201ENST00000446164 246 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGN4O00479 SUMO2P2-201ENST00000456482 255 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGN4O00479 AC092757.1-201ENST00000467293 467 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 RPS23P4-201ENST00000487908 423 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HMGN4O00479 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.8□□□□□ -2.28
HMGN4O00479 DUXAP5-201ENST00000529668 529 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 CBX3P8-201ENST00000532412 525 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGN4O00479 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGN4O00479 AL022067.1-201ENST00000602426 454 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AP003973.1-201ENST00000604639 691 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AC011374.2-201ENST00000607135 526 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AC009318.4-201ENST00000620496 486 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AC024595.1-201ENST00000623088 387 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 AP003476.1-201ENST00000623984 516 ntBASIC0.8□□□□□ -2.28
HMGN4O00479 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HMGN4O00479 ICE2P2-201ENST00000483823 2787 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
HMGN4O00479 RNU6-1080P-201ENST00000383982 107 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 RNU6-939P-201ENST00000384634 107 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL136133.1-201ENST00000413694 376 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
HMGN4O00479 RPS15AP12-201ENST00000419498 388 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AC008850.1-201ENST00000427546 362 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AC241584.1-201ENST00000438469 1241 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGN4O00479 Z73417.1-201ENST00000447373 778 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.79□□□□□ -2.28
HMGN4O00479 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.79□□□□□ -2.28
HMGN4O00479 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.79□□□□□ -2.28
HMGN4O00479 AC008379.1-201ENST00000463655 464 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.79□□□□□ -2.28
HMGN4O00479 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.79□□□□□ -2.28
HMGN4O00479 LARP1BP2-201ENST00000486594 519 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AC099513.1-201ENST00000490423 301 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.79□□□□□ -2.28
HMGN4O00479 AL391813.1-201ENST00000603098 260 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.6-201ENST00000603753 252 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.11-201ENST00000604059 253 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.10-201ENST00000604330 253 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AC008162.1-201ENST00000604718 254 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.1-201ENST00000604752 252 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.2-201ENST00000604983 252 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 MTND4LP5-201ENST00000605152 292 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.5-201ENST00000605253 252 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.4-201ENST00000605279 254 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.12-201ENST00000605291 253 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.8-201ENST00000605353 252 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.9-201ENST00000605428 253 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AL670379.7-201ENST00000605823 252 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AC008121.3-201ENST00000618726 433 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 MIR6130-201ENST00000619419 109 ntBASIC0.79□□□□□ -2.28
HMGN4O00479 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.79□□□□□ -2.28
HMGN4O00479 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 RNU2-68P-201ENST00000410878 191 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGN4O00479 MED14P1-201ENST00000430517 648 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 TOMM22P2-201ENST00000430735 237 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGN4O00479 RSU1P2-202ENST00000437884 485 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.78□□□□□ -2.28
HMGN4O00479 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGN4O00479 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGN4O00479 RPS27P23-201ENST00000487608 251 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.78□□□□□ -2.28
HMGN4O00479 SNORA4.4-201ENST00000515921 135 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGN4O00479 AC034114.1-201ENST00000520293 285 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 AP000907.2-201ENST00000530827 353 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGN4O00479 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.78□□□□□ -2.28
HMGN4O00479 MIR4765-201ENST00000585007 77 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 SUMO2P14-201ENST00000604488 293 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 AL161729.4-201ENST00000604650 476 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGN4O00479 AC009233.1-201ENST00000616477 371 ntBASIC0.78□□□□□ -2.28
HMGN4O00479 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.78□□□□□ -2.28
HMGN4O00479 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms