Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC008521.1-201ENST00000587471 187 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 BNIP3P9-201ENST00000603714 553 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 MIR15A-201ENST00000607334 83 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC092954.2-201ENST00000609103 430 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 FTX_3.1-201ENST00000610451 147 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC011155.2-201ENST00000623202 216 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC034229.5-201ENST00000624258 185 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 AL157786.1-207ENST00000627771 695 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LRRC53A6NM62 Z99571.1-201ENST00000636677 394 ntBASIC3.22□□□□□ -1.89
LRRC53A6NM62 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.21□□□□□ -1.89
LRRC53A6NM62 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
LRRC53A6NM62 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC53A6NM62 OR4G2P-201ENST00000328113 903 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 SNORD115-7-201ENST00000365306 82 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 DYNLT3P1-201ENST00000378574 347 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 Y_RNA.534-201ENST00000384599 112 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 Y_RNA.576-201ENST00000384781 102 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 UBE2V1P2-201ENST00000397758 440 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 AF274854.1-201ENST00000413236 615 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 NDUFB4P5-201ENST00000415445 361 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 MRPL50P2-201ENST00000416821 482 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 AC099548.1-201ENST00000421443 426 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 OR2B8P-201ENST00000432841 938 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 SNRPEP9-201ENST00000436794 238 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 PSPHP1-201ENST00000450062 261 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 RPS29P15-201ENST00000458329 171 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 RNU7-182P-201ENST00000459009 62 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 SNORA84-201ENST00000459229 133 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 AC117440.1-201ENST00000474107 571 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 RPS29P2-201ENST00000479278 136 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 SUMO2P6-201ENST00000505273 288 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 MTND4LP22-201ENST00000508209 276 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 RNU6-314P-201ENST00000516574 104 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 RNU6-914P-201ENST00000516749 109 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 RNA5SP165-201ENST00000517142 115 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 AP001893.2-201ENST00000526949 202 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 ADI1P3-201ENST00000549509 470 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 AC012507.3-201ENST00000603556 477 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 AC017083.3-201ENST00000609955 700 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 AL138880.2-201ENST00000616214 239 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 AL359880.1-201ENST00000621879 266 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 AC139792.3-201ENST00000623525 224 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC53A6NM62 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LRRC53A6NM62 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC53A6NM62 AC103710.2-202ENST00000641454 2853 ntBASIC3.21□□□□□ -1.9
LRRC53A6NM62 SNORA4.3-201ENST00000365564 137 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 MIR181B1-201ENST00000385240 110 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 AL591416.1-201ENST00000404015 867 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 OR51A5P-201ENST00000415429 942 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 DPPA2P1-201ENST00000428060 556 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 C8orf59P1-201ENST00000429930 303 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 RPS29P6-201ENST00000438196 145 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 AC006028.1-201ENST00000438379 402 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 RPL23AP20-201ENST00000447965 421 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 AL162395.1-201ENST00000457882 422 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 AC068135.2-201ENST00000569293 1028 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 AC004492.1-201ENST00000607036 742 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 AP001596.2-201ENST00000608410 312 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 AL359547.2-201ENST00000615810 418 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 SEPT14P19-203ENST00000633205 211 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 AL512643.1-201ENST00000635735 524 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 U6.114-201ENST00000636407 96 ntBASIC3.2□□□□□ -1.9
LRRC53A6NM62 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LRRC53A6NM62 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRC53A6NM62 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC53A6NM62 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 RNU6-1029P-201ENST00000384109 107 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 Y_RNA.505-201ENST00000384489 102 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 RNU6-606P-201ENST00000384721 111 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 RNU6-780P-201ENST00000391030 104 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 CISD1P1-201ENST00000393907 327 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 BMS1P22-201ENST00000414726 313 ntBASIC3.19□□□□□ -1.9
LRRC53A6NM62 AL451074.5-201ENST00000415894 435 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms