Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 DEFB131D-201ENST00000526803 184 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 AC005832.3-201ENST00000537929 631 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 AC091544.4-201ENST00000555268 342 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 AL136520.1-202ENST00000555494 763 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 CYCSP2-201ENST00000558168 301 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 MIR3122-201ENST00000577243 73 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 MIR4648-201ENST00000580107 72 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 AC069294.1-201ENST00000608397 350 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 AL121652.1-201ENST00000608851 448 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 AC004908.2-201ENST00000609090 574 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 MIR3199-2-201ENST00000636243 86 ntBASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HHLA3Q9XRX5 RNU6-224P-201ENST00000384055 107 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AL590084.1-201ENST00000407885 387 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 MTCYBP38-201ENST00000417160 1123 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 RPL31P63-201ENST00000422565 375 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 HMGB3P17-201ENST00000504195 649 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 RNU6-927P-201ENST00000516199 100 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 MIR892C-201ENST00000516410 77 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 RNA5SP165-201ENST00000517142 115 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC023538.1-201ENST00000534576 736 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC021739.1-201ENST00000559631 174 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC105245.1-201ENST00000581934 244 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 UBE2L4-201ENST00000587688 464 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC021171.1-201ENST00000603137 706 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC124016.2-201ENST00000610058 665 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AL158801.5-201ENST00000623123 465 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC110994.2-201ENST00000635481 492 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AP006437.1-201ENST00000641440 3685 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 AC011477.1-204ENST00000623416 1325 ntBASIC1.4□□□□□ -2.19
HHLA3Q9XRX5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 RNU6-744P-201ENST00000365557 107 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 RNU6-432P-201ENST00000384196 109 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 RNU6-1316P-201ENST00000384242 108 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 U6atac.2-201ENST00000408644 118 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AL139156.1-201ENST00000412785 841 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 RPL26P27-201ENST00000414397 437 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 EIF1AXP1-201ENST00000419267 435 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 TIMM9P2-201ENST00000419324 266 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 BX276092.3-201ENST00000424182 230 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 EIF4EP4-201ENST00000424916 578 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 FABP5P14-201ENST00000437273 393 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 MTCO3P45-201ENST00000443036 613 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC124916.1-201ENST00000444020 547 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC020550.1-201ENST00000447385 163 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 TPT1P14-201ENST00000448018 505 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 HMGN2P10-201ENST00000448085 265 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 PPP1R2P5-201ENST00000457256 603 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC013267.1-201ENST00000458227 267 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 RPL38P4-201ENST00000502376 214 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC093752.1-206ENST00000511823 336 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 RPL23AP94-201ENST00000512518 302 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 MTND2P31-201ENST00000512602 616 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 MTND5P13-201ENST00000513046 1079 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC008837.2-201ENST00000513076 418 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 SNORA31.23-201ENST00000517219 133 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 SNORA31.25-201ENST00000517242 134 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC006199.1-201ENST00000548728 219 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 NACAP3-201ENST00000552100 481 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AL133241.1-201ENST00000556832 487 ntBASIC1.39□□□□□ -2.19
HHLA3Q9XRX5 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms