Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 AC016769.3-201ENST00000396562 315 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 RNU4-26P-201ENST00000410270 107 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.646-201ENST00000410980 101 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 AC006548.1-201ENST00000427470 102 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 OSTCP8-201ENST00000445117 448 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 FO393415.2-201ENST00000480085 343 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 AC011005.2-201ENST00000487324 359 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.665-201ENST00000516177 98 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 RPL7P20-201ENST00000520308 745 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 AP002770.2-201ENST00000543613 532 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 AL356432.3-201ENST00000568952 465 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 MIR3118-1-201ENST00000581787 76 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 MIR3162-201ENST00000581818 82 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 MIR3942-201ENST00000585264 109 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 AC098848.2-201ENST00000588023 330 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 CR381572.1-201ENST00000625098 102 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 CYP3A51P-201ENST00000633513 256 ntBASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
COL17A1Q9UMD9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.29-201ENST00000362570 113 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 RNU6-545P-201ENST00000362681 104 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.255-201ENST00000364581 97 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.483-201ENST00000384380 101 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AL024474.1-201ENST00000404655 591 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC127526.1-201ENST00000417526 366 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 RPS15AP12-201ENST00000419498 388 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 YWHAZP8-201ENST00000436935 731 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC105402.2-201ENST00000438503 358 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 DDX3P2-201ENST00000446138 111 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 BX276092.4-201ENST00000452056 248 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 RNU6-237P-201ENST00000515985 71 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 RNU6-864P-201ENST00000516256 108 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.700-201ENST00000516806 100 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 U4.6-201ENST00000621618 127 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC139713.2-215ENST00000641428 5037 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AC083843.2-201ENST00000568248 6253 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 TPTE2P4-201ENST00000258589 1605 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 AL022311.1-201ENST00000623726 19416 ntBASIC5.43□□□□□ -1.54
COL17A1Q9UMD9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.222-201ENST00000364264 102 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 RNU6-1013P-201ENST00000384180 107 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 RNU6-713P-201ENST00000384761 107 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 MIR93-201ENST00000385024 80 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 RNA5SP424-201ENST00000390988 115 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 SSXP10-201ENST00000402595 565 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 RNU2-20P-201ENST00000410425 191 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 RNU6-735P-201ENST00000410612 107 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 RPL21P2-201ENST00000440049 481 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 RPL39P5-202ENST00000512505 151 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 AL355297.3-201ENST00000604082 446 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 AC093732.2-201ENST00000607950 274 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 ATP5A1P2-202ENST00000616464 443 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 AL732372.2-225ENST00000642124 456 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 KPNA2P2-201ENST00000419546 1489 ntBASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.210-201ENST00000364161 110 ntBASIC5.41□□□□□ -1.54
COL17A1Q9UMD9 RNU6-169P-201ENST00000365336 107 ntBASIC5.41□□□□□ -1.54
COL17A1Q9UMD9 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.41□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.493-201ENST00000384422 102 ntBASIC5.41□□□□□ -1.54
COL17A1Q9UMD9 Y_RNA.496-201ENST00000384444 101 ntBASIC5.41□□□□□ -1.54
COL17A1Q9UMD9 MIR1302-6-201ENST00000408466 90 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms